Pairwise Alignments

Query, 188 a.a., site-specific integrase from Magnetospirillum magneticum AMB-1

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

 Score = 42.7 bits (99), Expect = 6e-09
 Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 21/182 (11%)

Query: 5   KVLSEAELKRVLSVV-ANQRHAARNRVALMLSFYAGMRVGEIAHLKLGDV--------ID 55
           K LSEA+++ +L+    ++    R+R  L + +  G+RV E+  L L  V        + 
Sbjct: 112 KSLSEADVEALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVM 171

Query: 56  GDGRVKDQIVLPASYTKTAEARTVFVSGKLRRELERFLSCNTTTDRAAPFLVTQKATAFS 115
           G G  K+++V         E   V+V   +R      L     +D   P L  ++ T   
Sbjct: 172 GKGS-KERLV------PMGEEAIVWVERYMRDARSELLG-GRPSDVLFPSLRGEQMTR-- 221

Query: 116 ANTLCQLFGQIYALAGIDGA-SSHSGRRWFITQMAHKGVSAKVIMTLAGHRHLSTTQRYI 174
             T          +AGI  A S H+ R  F T + + G   +V+  L GH  LSTTQ Y 
Sbjct: 222 -QTFWHRIKHQAKVAGIGKALSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYT 280

Query: 175 EV 176
            V
Sbjct: 281 HV 282