Pairwise Alignments

Query, 188 a.a., site-specific integrase from Magnetospirillum magneticum AMB-1

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

 Score = 43.1 bits (100), Expect = 5e-09
 Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 13/178 (7%)

Query: 5   KVLSEAELKRVLSVV-ANQRHAARNRVALMLSFYAGMRVGEIAHLKLGDVIDGDGRVKDQ 63
           K LSEA+++ +L      +    R+R  L + +  G+RV E+  L L  V    G ++  
Sbjct: 112 KSLSEADVEALLQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVM 171

Query: 64  IVLPASYTKTAEARTVFVSGKLRRELERFLS---CNTTTDRAAPFLV-TQKATAFSANTL 119
                   K ++ R V +  +    LER+           R +  L  +Q+    +  T 
Sbjct: 172 -------GKGSKERLVPMGEEAVVWLERYQRDGRAELLNGRPSDVLFPSQRGEQMTRQTF 224

Query: 120 CQLFGQIYALAGIDGA-SSHSGRRWFITQMAHKGVSAKVIMTLAGHRHLSTTQRYIEV 176
                    +AGID   S H+ R  F T + + G   +V+  L GH  LSTTQ Y  V
Sbjct: 225 WHRIKHHARVAGIDKPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHV 282