Pairwise Alignments

Query, 795 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 563 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  286 bits (731), Expect = 3e-81
 Identities = 170/411 (41%), Positives = 249/411 (60%), Gaps = 18/411 (4%)

Query: 245 VLASSYASVQPLIDALDDEALTAMKVAKERAHQADETAGRMMLSVMASGFAIMVVIGTLI 304
           V A  Y S   L D  +     ++ +A              +L + A G  ++VV G   
Sbjct: 170 VSAGVYRSSDDLTDQTNQTVFNSLSIAVA------------LLVIGAIGSVLLVVYG--- 214

Query: 305 ARSIYGPITAMTGVMGELAGDNLSVTVPFTDRGDELGGMAKSVGHFKDQLIRVRQLEAAQ 364
              I  PI A+   M  LA  + +  V    RGDE+G MA++V  FK+ +IR RQLE   
Sbjct: 215 ---IRRPIAALNAAMVRLATGDTTTEVVGAGRGDEIGEMARTVEVFKESMIRTRQLEQEA 271

Query: 365 EEQKRRAEADRLAAMRKLADTFEGSVGKVIETVTSAATELEAASGQMAGTATETSSQATT 424
           ++ +  A A++      +A +FE  VG +++ V S+ATEL+A S Q+A    E  +Q T 
Sbjct: 272 KDAEVEAAAEKRRGTLDMARSFEERVGSIVDAVGSSATELQATSSQLAAAVEEVGAQCTA 331

Query: 425 VASAAQQASTNVQTVASATEELASSIKEIAHQVERSQAVSHHAGDEAHTTTMQVQALSAN 484
           VA+A++QAS NVQTVA+A+EEL++SI E++ +V R+   S  A + A     Q+  LSA+
Sbjct: 332 VAAASEQASANVQTVAAASEELSASIGELSDRVGRAADRSRLAAEGAGEAQRQLDLLSAS 391

Query: 485 VGKIGEIVKLINDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKDLANQTAKATSEI 544
           + ++ +IV  IN +ASQTNLLALNATIEAARAGEAGKGFAVVA EVK+LANQT   T +I
Sbjct: 392 IDQVDQIVASINAVASQTNLLALNATIEAARAGEAGKGFAVVASEVKNLANQTHAMTEQI 451

Query: 545 AGQIQAVQDSTRVAVHAIESISKVIAEMGEISSAVAAAVEQQTAATGEIARNVEQAAEGT 604
             QI AV+ ++   V A+ SI   + E+   ++ +A +V QQ+ AT EI+RN +QAA  T
Sbjct: 452 TNQIGAVKAASGRTVGAMRSIIGQVEEISNSTADMAQSVNQQSGATSEISRNAQQAAVST 511

Query: 605 QEVTRNIVSVEQAAKETGQAAEQIRESSGELSRQAEFLRHEVGQFLIQVRS 655
            EV+RN++ ++QA  ETG A   ++ +S +L+RQA  L+  +  FL ++R+
Sbjct: 512 TEVSRNVLGIQQAENETGAATNNVKHASDDLARQAAMLKQAMDSFLSELRA 562