Pairwise Alignments

Query, 795 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 785 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58

 Score =  152 bits (385), Expect = 5e-41
 Identities = 119/435 (27%), Positives = 207/435 (47%), Gaps = 60/435 (13%)

Query: 264 ALTAMKVAKERAHQADETAGRMMLSVMASGFAIMVVIGTLIARSIYGPITAMTGVMGELA 323
           A+  +    E+A Q       + L+V  +  A+ +V   +I   +  PI+ +T  M  L+
Sbjct: 305 AMDVLDANAEKAKQDAFIGSVVYLAVFIATLALCIVSLAVIVGRVTRPISRLTNAMMALS 364

Query: 324 GDNLSVTVPFTDRGDELGGMAKSVGHFKDQLIRVRQLEAAQEEQKRRAEADRL------- 376
           G NL++ +    RGDE+G MA++V  F++  IR RQLEA     + +AE DR+       
Sbjct: 365 GGNLAIDIAGAKRGDEIGEMARAVEVFREAAIRNRQLEADAVANREQAERDRIELQQRAE 424

Query: 377 ---------------AAMRKLAD--------------------TFEGSVGKVIETVTSAA 401
                            +R+LA                      F  SV ++ E +TS  
Sbjct: 425 AEAEERLNQATGSLAGGLRRLASGDMVCEIATPFAPQFEALRHDFNSSVHQLREALTSVG 484

Query: 402 TELEAASGQMAGTATETSSQATTVASAAQQASTNVQTVASATEELASSIK-------EIA 454
             ++  +    G A E SS +  ++   +Q + +++  A+A EE+ +++        E  
Sbjct: 485 QSVQTVN----GGAHEVSSASDDLSRRTEQQAASLEETAAALEEITANVSATSKRAGEAR 540

Query: 455 HQVERSQAVSHHAGDEAHTTTMQVQALSANVGKIGEIVKLINDIASQTNLLALNATIEAA 514
             V  ++  +  +G         ++ +  +  +IG+I+ +I++IA QTNLLALNA +EAA
Sbjct: 541 DTVREARTKADLSGKVVRDAVAAMERIEHSSRQIGQIIGVIDEIAFQTNLLALNAGVEAA 600

Query: 515 RAGEAGKGFAVVAGEVKDLANQTAKATSEIAGQIQAVQDSTRVAVHAIESISKVIAEMGE 574
           RAG+AGKGFAVVA EV++LA ++A A  EI    Q +  S   AV   E + K++A+ G 
Sbjct: 601 RAGDAGKGFAVVAQEVRELAQRSANAAKEIK---QLINTS---AVAVGEGV-KLVADTGV 653

Query: 575 ISSAVAAAVEQQTAATGEIARNVEQAAEGTQEVTRNIVSVEQAAKETGQAAEQIRESSGE 634
             S +   V    +    IA   ++ + G  EV   +  ++QA ++     E++  +   
Sbjct: 654 GLSEIEQLVLSVNSHMDAIATAAQEQSAGLSEVNTAVNHMDQATQQNAAMVEEMNAAGAG 713

Query: 635 LSRQAEFLRHEVGQF 649
           L+++   L+  + QF
Sbjct: 714 LAQECANLQALLAQF 728