Pairwise Alignments

Query, 311 a.a., tRNA pseudouridine(55) synthase TruB from Magnetospirillum magneticum AMB-1

Subject, 331 a.a., tRNA pseudouridine synthase B (EC 4.2.1.70) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  193 bits (490), Expect = 5e-54
 Identities = 112/253 (44%), Positives = 144/253 (56%), Gaps = 4/253 (1%)

Query: 9   PVNGWLAIDKPLGIGSTQVVAKVKRLLNAAKVGHGGTLDPLASGILPIALGEATKTVQYV 68
           PV+G L +DKPLG+ S Q + K K LL A K GH GTLDPLASG+LP+  G ATK  Q  
Sbjct: 12  PVHGVLLLDKPLGLSSNQALQKAKWLLRAEKAGHTGTLDPLASGVLPLCFGAATKFSQIH 71

Query: 69  MDGSKTYRFQVRWGEATASCDRESEVIETSPHRPTAEAIAAALPAFLGEIDQIPPAYSAI 128
           +D  KTY   VR G  T++ D E EVI+T     +   +   L  F G I Q+PP +SA+
Sbjct: 72  LDADKTYETVVRLGVKTSTGDAEGEVIDTRAVNCSVGQVVEVLDRFTGPIAQVPPMHSAL 131

Query: 129 KIDGQRAYDLARAGEEVEIKPRRVAIKSFTLLG---QPDADHADFEVHCGKGTYVRSLAR 185
           K DG+  Y+ AR GE VE + R V I    LL    Q DA      V C KGTY+R+L  
Sbjct: 132 KKDGKALYEYARDGETVEREARHVVIHDLELLDMQLQGDAPQLRLRVRCSKGTYIRTLGE 191

Query: 186 DLSLALGTVGHVSVLRRIACGPFNEQNAISLESLEDLSQVPAPWTFLLPIETALDDIPAL 245
           D+  ALG  GH+ +LRRIA GPF+    +SL +LE L++       LLP++  L+    +
Sbjct: 192 DIGEALGCGGHLILLRRIATGPFDLSQCVSLAALEALNEEDRQ-ARLLPVQCLLEGHDPV 250

Query: 246 ALTESEARRLQSG 258
            L    A R  SG
Sbjct: 251 TLDADNAGRFLSG 263