Pairwise Alignments

Query, 152 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Magnetospirillum magneticum AMB-1

Subject, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Serratia liquefaciens MT49

 Score = 81.6 bits (200), Expect = 5e-21
 Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 6/156 (3%)

Query: 1   MRLLIAAVGKAKAGPEQDLFRQYCRRLSP--PPVLKEVEEKRPLAGPQLKA---REAELL 55
           M+L + AVG       Q  F  Y  R     P  L E+   +      +K    +E E +
Sbjct: 1   MKLQLVAVGTKMPDWVQTGFMDYLHRFPKDMPFELTEIPAGKRGKNADIKRILEKEGEQM 60

Query: 56  LATLPEGAKVVALDEKGRDIGSVDFAHRLRDWRDSGCQDVAFLIGGADGHGDAVRERADL 115
           LA + +G ++V LD  G    +   A +L  W+  G ++V+ LIGG +G   A +  A+ 
Sbjct: 61  LAAVGKGNRIVTLDIPGTPWETPQLAQQLERWKQDG-RNVSLLIGGPEGLAPACKAAAEQ 119

Query: 116 LLSFGRMTWPHMLVRALLAEQLWRAHSILTGHPYHR 151
             S   +T PH LVR L+AE L+RA SI T HPYHR
Sbjct: 120 SWSLSPLTLPHPLVRVLVAESLYRAWSITTNHPYHR 155