Pairwise Alignments

Query, 238 a.a., N-acetylmuramoyl-L-alanine amidase from Magnetospirillum magneticum AMB-1

Subject, 417 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 48.9 bits (115), Expect = 2e-10
 Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 29/238 (12%)

Query: 16  QPALAG----CLIALDIGHYRDAPGEFSAHGVPELTFNTQLARRVGWELDRQGVAWTLIN 71
           QP  AG     +I LD GH  + PG    +   E     Q+ARR+   ++++G     + 
Sbjct: 178 QPGKAGRDRPIVIMLDPGHGGEDPGAIGKYKTREKDVVLQIARRLRALIEKEGNMKVYMT 237

Query: 72  AEGDI-TELAERPRRAARRGASLLLSLHHD---------------SVQDIYKTEWVWQGE 115
              DI   L  R  +A ++ A L +S+H D               S +    T   +  +
Sbjct: 238 RNEDIFIPLKVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQ 297

Query: 116 TRAHSEVFSGFGLFVSAANPRREESEAVARAIGDALLAEGLRPSLHHALPVEGENRPLLD 175
           T+  S++  G    VS +  R      V   + D + +  +  SL     V  +   + D
Sbjct: 298 TQNASDLIGG----VSKSGDRY-----VDHTMFDMVQSLTIADSLKFGKAVLKQLGKIND 348

Query: 176 PARGLYRYDGLAVLRQATMPAVLVEAGIIVNRDDEPLIASEPYRAAFATAIAAAARAH 233
             +      G AVL+   +P++LVE   I N ++E  + +  ++   A +I A  +A+
Sbjct: 349 LHKNKVEQAGFAVLKAPDIPSILVETAFISNIEEERKLKTATFQQQVAESILAGIKAY 406