Pairwise Alignments

Query, 238 a.a., N-acetylmuramoyl-L-alanine amidase from Magnetospirillum magneticum AMB-1

Subject, 289 a.a., N-acetylmuramoyl-l-alanine amidase I (NCBI) from Escherichia coli BW25113

 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 13/215 (6%)

Query: 23  LIALDIGHYRDAPGEFSAHGVPELTFNTQLARRVGWELDRQGVAWTLINAEGDITELAER 82
           ++ LD GH     G    +G  E      +A+ V   L   G+   L  +      L +R
Sbjct: 58  VVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDARLTRSGDTFIPLYDR 117

Query: 83  PRRAARRGASLLLSLHHDSVQDIYKT-EWVWQGETRAHSEVFSGFGLFVSAANPRREESE 141
              A + GA L +S+H D   +       V+    R  S   S    ++S    R +E  
Sbjct: 118 VEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGAS---SAMAKYLSERENRADEVA 174

Query: 142 AVARAIGDALLAEGL-----RPSLHHALPVEGENRPLLDPARGLYRYD----GLAVLRQA 192
                  D LL + L       ++ ++L +       + P   L+  +       VL+  
Sbjct: 175 GKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKLHSRNTEQAAFVVLKSP 234

Query: 193 TMPAVLVEAGIIVNRDDEPLIASEPYRAAFATAIA 227
           ++P+VLVE   I N ++E L+ +  +R   ATAIA
Sbjct: 235 SVPSVLVETSFITNPEEERLLGTAAFRQKIATAIA 269