Pairwise Alignments

Query, 358 a.a., site-specific DNA-methyltransferase from Magnetospirillum magneticum AMB-1

Subject, 382 a.a., Type II restriction adenine-specific methylase (EC 2.1.1.72) from Sphingobium sp. HT1-2

 Score =  461 bits (1187), Expect = e-134
 Identities = 210/346 (60%), Positives = 267/346 (77%), Gaps = 2/346 (0%)

Query: 6   NTILSGDCIAMMNSLPAGSVDLIFADPPYNLQLGGELLRPNNSKVEGVDEEWDRFSDFAA 65
           N +L GDCIA M  LP G +D+IFADPPYNLQLGG+L RP   +V+ VD +WD+F   ++
Sbjct: 31  NRLLRGDCIAEMAKLPDGCIDMIFADPPYNLQLGGDLFRPEGGRVDAVDNDWDKFDTLSS 90

Query: 66  YDSFTRDWLKAARRVLKDDGGLWVIGSYHNIFRVGSILQDLGFWMLNDIVWRKSNPMPNF 125
           YD FT+ WL  ARR+LK +G +WVIGSYHNIFRVG+ LQD GFW+LNDI+WRK+NPMPNF
Sbjct: 91  YDRFTKAWLAQARRILKPNGTIWVIGSYHNIFRVGAALQDEGFWILNDIIWRKANPMPNF 150

Query: 126 KGTRFTNAHETMIWCAKSSDSRYTFNYDTMKALNDDLQMRSDWTLPLCTGGERLRNAGRK 185
           KGTRFTNAHET+IW ++  D++YTFNY  MK LND+LQMRSDW LP+C G ERL+  G K
Sbjct: 151 KGTRFTNAHETLIWASQGEDAKYTFNYKAMKTLNDELQMRSDWVLPICGGQERLKRNGTK 210

Query: 186 THPTQKPESLLYRVIMASTKPGDVVLDPFFGTGTTGAVAKKLGRNFIGCERDPEYIAAAK 245
            HPTQKPESLLYRV+++ TKPGD+VLDPFFGTGTTGAVAK+LGR +IG ER+P+YI  A+
Sbjct: 211 AHPTQKPESLLYRVMLSCTKPGDIVLDPFFGTGTTGAVAKRLGRQWIGIEREPDYIEVAE 270

Query: 246 DRIAKVIPVADPSLLLTPSKRAEPRVPFGTVLERGLLTAGDLLFGGTRHDKVAKVRADGT 305
           +RIA+ +P+ + +L +  + R +P+V FGT++E G L  G ++    R    A VRADG+
Sbjct: 271 ERIAEALPLDESALAIMQTARQQPKVAFGTLVETGYLQPGSVVMDSKRRWS-ATVRADGS 329

Query: 306 LITDDHRGSIHKVGALVQGAPACNGWTYWHFQASSEDFLPIDVLRQ 351
           L      GSIHK+GA +QGAP+CNGWT+WH + + +   PID LRQ
Sbjct: 330 LAVGSDTGSIHKLGATLQGAPSCNGWTFWHIEKAGK-LHPIDTLRQ 374