Pairwise Alignments

Query, 308 a.a., site-specific tyrosine recombinase XerD from Magnetospirillum magneticum AMB-1

Subject, 306 a.a., Tyrosine recombinase XerD from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  167 bits (424), Expect = 2e-46
 Identities = 114/294 (38%), Positives = 169/294 (57%), Gaps = 10/294 (3%)

Query: 11  SFLEMMQVERGASPNTLDAYGRDLADFAEFLDGRGFS-PLRADARAVAAYIARQAEIGMA 69
           +F++ + +E G S NTLDAY RDL    ++L G G + P  ++A     +  R AE    
Sbjct: 16  AFIDSLWLEEGLSRNTLDAYRRDLVLLGQWLAGHGKTLPETSEADLNQYFSDRHAET--R 73

Query: 70  ARTQARRLSCLKQFYGFVFAERLRPDDPTANIDAPRLGRPLPKYLRREEVTALLDAARAL 129
           A T  RRL+  K+++ +   ER+   DPT  +   R    +PK +   +V ALL+A    
Sbjct: 74  ATTANRRLTVFKRYFRWALRERVIQVDPTLRLVPARQPLRVPKTMSEAQVEALLNAPDV- 132

Query: 130 EGSD-GILMTALLETLYAAGLRVSELVSLPLSAVARDPSVLVVRGKGSKERMVPLSDPAR 188
            G+  G+    +LE +YA+GLRVSELV+L    V  +  VL + GKG+KER+VP    A 
Sbjct: 133 -GTPLGLRDRCMLELIYASGLRVSELVTLKTWHVGMNEHVLRITGKGNKERLVPFGQLAG 191

Query: 189 AALLAWKVERQTLVPKSKPSRWLFPSS-GALGH--LTRSGFAKMLGRVAVLAGLDPAKVS 245
             L  +  + +  +   + S  LF +S GA     +TR+ F +++ + A  AG+  + +S
Sbjct: 192 QWLQRYLGQARVEILNGQQSEDLFVTSRGARAGEAMTRAMFWQLVKKYAAQAGIT-SPLS 250

Query: 246 PHVLRHSFASHLLAGGADLRSVQEMLGHADIATTEIYTHLIDDEAGRLVRAHHP 299
           PH LRH+FA+HLL  GADLR+VQ +LGHADI+TT IYTH+  +    +V  HHP
Sbjct: 251 PHTLRHAFATHLLNHGADLRAVQMLLGHADISTTTIYTHVARERLKSIVAQHHP 304