Pairwise Alignments

Query, 308 a.a., site-specific tyrosine recombinase XerD from Magnetospirillum magneticum AMB-1

Subject, 298 a.a., Tyrosine recombinase XerD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  203 bits (517), Expect = 4e-57
 Identities = 125/296 (42%), Positives = 176/296 (59%), Gaps = 8/296 (2%)

Query: 9   IESFLEMMQVERGASPNTLDAYGRDLADFAEFLDGRGFSPLRADARAVAAYIARQAEIGM 68
           IE FL+ + +ER  + NTL AY RDL+    +L  RG +   A A  +   +A + E G 
Sbjct: 8   IEQFLDALWLERNLAENTLSAYRRDLSMVVAWLHHRGKTLATAQADDLQTLLAERVEGGY 67

Query: 69  AARTQARRLSCLKQFYGFVFAERLRPDDPTANIDAPRLGRPLPKYLRREEVTALLDAA-- 126
            A + AR LS +++F+  ++ E+ R DDP+A + +P+L + LPK L   +V  LL A   
Sbjct: 68  KATSSARLLSAMRRFFQHLYREKYREDDPSAQLASPKLPQRLPKDLSEAQVERLLQAPLI 127

Query: 127 -RALEGSDGILMTALLETLYAAGLRVSELVSLPLSAVARDPSVLVVRGKGSKERMVPLSD 185
            + LE  D     A+LE LYA GLRVSELV L +S ++    V+ V GKG+KER+VPL +
Sbjct: 128 DQPLELRD----KAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGE 183

Query: 186 PARAALLAWKVERQTLVPKSKPSRWLFPSSGALGHLTRSGFAKMLGRVAVLAGLDPAKVS 245
            A   L  +    +  +        LFPS  A   +TR  F   +   AVLAG+D  K+S
Sbjct: 184 EAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQ-QMTRQTFWHRIKHYAVLAGIDSEKLS 242

Query: 246 PHVLRHSFASHLLAGGADLRSVQEMLGHADIATTEIYTHLIDDEAGRLVRAHHPLA 301
           PHVLRH+FA+HLL  GADLR VQ +LGH+D++TT+IYTH+  +   +L + HHP A
Sbjct: 243 PHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA 298