Pairwise Alignments

Query, 308 a.a., site-specific tyrosine recombinase XerD from Magnetospirillum magneticum AMB-1

Subject, 331 a.a., site-specific tyrosine recombinase XerD from Agrobacterium fabrum C58

 Score =  273 bits (698), Expect = 4e-78
 Identities = 156/311 (50%), Positives = 201/311 (64%), Gaps = 18/311 (5%)

Query: 9   IESFLEMMQVERGASPNTLDAYGRDLADFAEFLDGRGFSPLRADARAVAAYIARQAEIGM 68
           +ESFLEMM  ERGA+ NTL +Y  DLAD  EFL  RG S   A    ++AY+   A  G 
Sbjct: 14  LESFLEMMSAERGAAANTLSSYEHDLADLREFLGRRGQSLTEAQTPDLSAYLTHLAAQGF 73

Query: 69  AARTQARRLSCLKQFYGFVFAERLRPDDPTANIDAPRLGRPLPKYLRREEVTALLDAARA 128
           AA +QARRLS ++QFY F+++E LR DDPT  IDAPR G  LPK +   +V  LL  A  
Sbjct: 74  AATSQARRLSSMRQFYRFLYSEGLRGDDPTGIIDAPRKGLALPKTMSVADVNRLLGLAAQ 133

Query: 129 LEGSDG------ILMTALLETLYAAGLRVSELVSLPLSAVARDPSVLVVRGKGSKERMVP 182
              ++G      I M  LLE LYA G+RVSELVSLP+  + ++   L++RGKG+K+RMV 
Sbjct: 134 EAATEGPGQLARIRMHLLLELLYATGMRVSELVSLPVKVLRQEGRFLMIRGKGNKDRMVL 193

Query: 183 LSDPARAALLAWKVERQTLVP-KSKP-----------SRWLFPSSGALGHLTRSGFAKML 230
           LS  A  A+  ++  R+ L   KSK            S WLFPS+   GHL R  FA+ L
Sbjct: 194 LSRAAIEAMEKYEAGRKALSQEKSKAAASQKKTDTAESPWLFPSNSKEGHLPRQVFARDL 253

Query: 231 GRVAVLAGLDPAKVSPHVLRHSFASHLLAGGADLRSVQEMLGHADIATTEIYTHLIDDEA 290
             +A+ AGL  + VSPHVLRH+FASHLL  GADLR+VQE+LGH+DI+TT+IYTH++++  
Sbjct: 254 KDIAIRAGLTASAVSPHVLRHAFASHLLQNGADLRAVQELLGHSDISTTQIYTHVLEERL 313

Query: 291 GRLVRAHHPLA 301
             LV+ HHPLA
Sbjct: 314 QELVQTHHPLA 324