Pairwise Alignments

Query, 384 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 447 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  297 bits (760), Expect = 4e-85
 Identities = 171/372 (45%), Positives = 251/372 (67%), Gaps = 2/372 (0%)

Query: 14  LITVAGIGLI--GAMASLIGKRTIAAPIDAMAAAMDKLRQRDYGVHIPGVGLTNEIGRMA 71
           LI+ A + L+  G +A+ +  R++  P  A+ A + K+   +    +P +   +EIG MA
Sbjct: 72  LISAAMVLLMVGGIIATALIIRSVVTPFTALTATISKIASGEKNTAVPCLEREDEIGEMA 131

Query: 72  SSLAVFRDAMVETERLTAEHEAELTERVERGRAMDSLARDFDRTVSGVLEVVSGAATELH 131
             + VFR A++  + + A   AE   R  R    + L  +FD  +S  + V++ ++TEL 
Sbjct: 132 RVIMVFRGALLSNDTMQARQIAEGAFRETRILRREQLTTEFDERISQFVGVLASSSTELV 191

Query: 132 ATAQGMQTIAEQTQDKATAVAAAAEEASSSVETVATAAEELSASIAEIARQVAQSSTAAQ 191
           ATA  M  +A  T  ++TAVAAA+EE S +++TVA+A EEL+AS++EI RQV+QS+T + 
Sbjct: 192 ATANEMARVAGDTTSRSTAVAAASEETSVNIQTVASAVEELAASVSEITRQVSQSATISG 251

Query: 192 QASDEARQTNTIVQGLAASSTRIGDVVSLINDIAAQTNLLALNATIEAARAGEAGKGFAV 251
            A  EA +T+ IV GL+ ++ +IG V +LI +IA+QTNLLALNATIEAARAGEAGKGF V
Sbjct: 252 NAVQEAERTDGIVMGLSDAANKIGTVAALIENIASQTNLLALNATIEAARAGEAGKGFTV 311

Query: 252 VAGEVKALANQTGKATEEISTQVGAVQTATREAVAAIGSIVGRIEEINHIATAISAAVEE 311
           VA EVK LA QT KAT +I  Q+ ++Q AT  +V AI +I G I EIN I+TAI++AVEE
Sbjct: 312 VANEVKNLAYQTVKATADIGEQIRSIQEATSASVEAIRTIGGTIREINGISTAIASAVEE 371

Query: 312 QSAATAEIARNVDQASQGTRQVSANVGGVSATAAETDAAAVQVLSAAQSLSREATELKDV 371
           QSAAT+EI+RNV +AS+    V+ N+  VS+ A++T AAA QVL AA  +S+++  ++  
Sbjct: 372 QSAATSEISRNVHEASKAVNDVNKNIADVSSGASQTGAAASQVLQAAGDVSKQSELIRKD 431

Query: 372 VDRFLEGVRTVQ 383
           V +FL G++++Q
Sbjct: 432 VVQFLSGIKSIQ 443