Pairwise Alignments

Query, 384 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 673 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  308 bits (788), Expect = 4e-88
 Identities = 179/372 (48%), Positives = 246/372 (66%), Gaps = 4/372 (1%)

Query: 9   LRLSILITVAGIGLIGAMASLIGKRTIAAPIDAMAAAMDKLRQRDYGVHIPGVGLTNEIG 68
           L L+ L  V G    G + S+I  R +A P+  M  AM  L + D+ V IPGVG  +EIG
Sbjct: 304 LALASLAAVGG----GMLFSVILARGVAVPLTGMTDAMSHLAKGDHTVSIPGVGRQDEIG 359

Query: 69  RMASSLAVFRDAMVETERLTAEHEAELTERVERGRAMDSLARDFDRTVSGVLEVVSGAAT 128
            MAS++ VFRD+MV  E L AE E     ++ R   +++ AR F+  V  V+  +  A  
Sbjct: 360 AMASAVQVFRDSMVRAETLAAEQEQARLAQLARASHIEASARQFEANVLKVVSDLGQAVG 419

Query: 129 ELHATAQGMQTIAEQTQDKATAVAAAAEEASSSVETVATAAEELSASIAEIARQVAQSST 188
            L  T+  M  IA +T ++A AVAAA+ +A+ +V+TVA AAEELSAS+ EI+R+V+ S+ 
Sbjct: 420 RLDNTSTSMAGIATKTSERAAAVAAASTQATCNVQTVAAAAEELSASVTEISRRVSDSTR 479

Query: 189 AAQQASDEARQTNTIVQGLAASSTRIGDVVSLINDIAAQTNLLALNATIEAARAGEAGKG 248
              QA D AR+TN++V GL +S+ RIG VV LI DIAAQT+LLA+NAT+EAARAGE+GKG
Sbjct: 480 ITAQAVDMARRTNSLVGGLTSSTDRIGQVVGLITDIAAQTSLLAMNATVEAARAGESGKG 539

Query: 249 FAVVAGEVKALANQTGKATEEISTQVGAVQTATREAVAAIGSIVGRIEEINHIATAISAA 308
           FAVVA EVK LA QT +AT EI+T V  VQ A      A+  I G I  ++ I++AI+AA
Sbjct: 540 FAVVASEVKKLAQQTARATGEITTYVAEVQGAGAHTAGALQDITGIIARLDEISSAIAAA 599

Query: 309 VEEQSAATAEIARNVDQASQGTRQVSANVGGVSATAAETDAAAVQVLSAAQSLSREATEL 368
           VE+QSAAT+EIARN +QA+ GT +V+ ++ GV+  A++T +A+ +V   A SL+R A  +
Sbjct: 600 VEQQSAATSEIARNANQAAGGTEEVNRHIHGVTEEASQTGSASGRVRGEAASLTRHAAAI 659

Query: 369 KDVVDRFLEGVR 380
              V+ FL  VR
Sbjct: 660 HSEVETFLSNVR 671