Pairwise Alignments

Query, 384 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 547 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  350 bits (897), Expect = e-101
 Identities = 197/371 (53%), Positives = 270/371 (72%), Gaps = 2/371 (0%)

Query: 11  LSILITVAGIGLIGAMASLIGKRTIAAPIDAMAAAMDKLRQRDYGVHIPGVGLTNEIGRM 70
           LSIL+    + +IG + +    R+I  P++AM  AM  L   D  V IP  G  +EIG M
Sbjct: 176 LSILVGAISV-VIGMVLAFFISRSITNPVNAMTRAMGVLAGGDTSVEIPATGQKDEIGEM 234

Query: 71  ASSLAVFRDAMVETERLTAEHE-AELTERVERGRAMDSLARDFDRTVSGVLEVVSGAATE 129
           A ++ VF+D  +  + +  E E A+     ER +AM ++A  F+  V G+++ VS  A+E
Sbjct: 235 AHAVQVFKDNAIRVKAMQKEQEDAKARAEAERKQAMLNMADSFESAVMGLVKGVSAQASE 294

Query: 130 LHATAQGMQTIAEQTQDKATAVAAAAEEASSSVETVATAAEELSASIAEIARQVAQSSTA 189
           + AT+Q M   A+QT  +A  VAAAA+EA+++V+TVA AAEELS+SI+EI+RQVA+++  
Sbjct: 295 MQATSQSMSAGAQQTSAQAATVAAAAQEATANVQTVAAAAEELSSSISEISRQVAEAAQV 354

Query: 190 AQQASDEARQTNTIVQGLAASSTRIGDVVSLINDIAAQTNLLALNATIEAARAGEAGKGF 249
           +  AS+E  +TN +VQGLA ++ +IG+VVSLINDIAAQTNLLALNATIEAARAG+AGKGF
Sbjct: 355 SATASEETARTNAMVQGLAHAADKIGEVVSLINDIAAQTNLLALNATIEAARAGDAGKGF 414

Query: 250 AVVAGEVKALANQTGKATEEISTQVGAVQTATREAVAAIGSIVGRIEEINHIATAISAAV 309
           AVVA EVK LANQT +ATEEIS+QVG+VQ  TR AV AI +I   IE++  I++ I++AV
Sbjct: 415 AVVANEVKNLANQTARATEEISSQVGSVQEETRRAVDAIRNIATVIEQVQQISSGIASAV 474

Query: 310 EEQSAATAEIARNVDQASQGTRQVSANVGGVSATAAETDAAAVQVLSAAQSLSREATELK 369
           EEQ AATAEIARNV +A++GT+ VSANV G++ TA+ET AA+ QVL+A+  L+R +  L+
Sbjct: 475 EEQGAATAEIARNVQEAAKGTQDVSANVQGITQTASETGAASQQVLAASGELARNSETLR 534

Query: 370 DVVDRFLEGVR 380
             VD+FL+GVR
Sbjct: 535 AEVDKFLDGVR 545