Pairwise Alignments

Query, 384 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 558 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  291 bits (745), Expect = 3e-83
 Identities = 169/372 (45%), Positives = 239/372 (64%), Gaps = 1/372 (0%)

Query: 10  RLSILITVAGIGLIGAMASLIGKRTIAAPIDAMAAAMDKLRQRDYGVHIPGVGLTNEIGR 69
           RLS+++ +    + G + +L   R+I  P+  +  A+ +L   D G+ +PGV   +E G 
Sbjct: 187 RLSVIVGLLAT-VFGLVLALAIGRSITNPLGDLVGAVRRLAGGDTGLAVPGVERRDEFGP 245

Query: 70  MASSLAVFRDAMVETERLTAEHEAELTERVERGRAMDSLARDFDRTVSGVLEVVSGAATE 129
           +A +L  +R +++E      E     T+R  R + ++   + FD+++   L  V  A   
Sbjct: 246 LAQALNGWRSSIMEAAARAEEERLARTQREARQQVIEVATQRFDQSIETTLSRVKAAVQA 305

Query: 130 LHATAQGMQTIAEQTQDKATAVAAAAEEASSSVETVATAAEELSASIAEIARQVAQSSTA 189
           LH +A  +   AEQTQ +++AV+ A +EA+++V TVA+A+ EL++SI EI+RQV QSS  
Sbjct: 306 LHGSADTLSANAEQTQRQSSAVSTATDEATANVGTVASASTELASSIHEISRQVRQSSDI 365

Query: 190 AQQASDEARQTNTIVQGLAASSTRIGDVVSLINDIAAQTNLLALNATIEAARAGEAGKGF 249
           AQ A  E  +    V G+A ++ RIG+VV LI+DIA+QTNLLALNATIE+ARAG+AGKGF
Sbjct: 366 AQAAETEVMEATRKVTGMAEAAQRIGNVVKLISDIASQTNLLALNATIESARAGDAGKGF 425

Query: 250 AVVAGEVKALANQTGKATEEISTQVGAVQTATREAVAAIGSIVGRIEEINHIATAISAAV 309
           AVVA EVK LA QT KATEEI+ Q+ AVQ  T+ AV AI  I   I  IN +ATAI+ AV
Sbjct: 426 AVVAHEVKNLAGQTAKATEEITLQISAVQAETQAAVEAISGISHTISRINELATAIAGAV 485

Query: 310 EEQSAATAEIARNVDQASQGTRQVSANVGGVSATAAETDAAAVQVLSAAQSLSREATELK 369
           EEQ AATAEIARNV+ A++GT +V+ N+ GV+  A+ET   A  V ++A  L  E+  L+
Sbjct: 486 EEQGAATAEIARNVELANEGTSEVARNIAGVAQAASETGGMAQAVFTSANGLLDESARLE 545

Query: 370 DVVDRFLEGVRT 381
             V  FL  VRT
Sbjct: 546 SEVREFLTSVRT 557