Pairwise Alignments

Query, 384 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 570 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  306 bits (785), Expect = 7e-88
 Identities = 185/376 (49%), Positives = 250/376 (66%), Gaps = 8/376 (2%)

Query: 9   LRLSILITVAGIGLIGAMASL----IGKRTIAAPIDAMAAAMDKLRQRDYGVHIPGVGLT 64
           L+L + +TV    L+GA++ L    I KR +A P+     AM  L   +  V I      
Sbjct: 197 LQLMVGVTV----LVGALSILVSWTIAKRNLATPLKRSILAMRDLADGNLDVAIRHTERR 252

Query: 65  NEIGRMASSLAVFRDAMVETERLTAEHEAELTERVERGRAMDSLARDFDRTVSGVLEVVS 124
           +EIG M  +L +F++      RL A   AE   R  R  A++ L  DF+ +V  VL  V+
Sbjct: 253 DEIGEMIRALEIFKENGQARHRLEAAQAAEQAARNRRQEAIERLTTDFNSSVFAVLNGVT 312

Query: 125 GAATELHATAQGMQTIAEQTQDKATAVAAAAEEASSSVETVATAAEELSASIAEIARQVA 184
            +A  L  +AQ M ++AE T  ++T VAAAAE+AS +VETVA AAE+L+AS  EIARQVA
Sbjct: 313 ESAHHLRDSAQSMTSVAEDTSRQSTVVAAAAEQASVNVETVAAAAEQLAASEHEIARQVA 372

Query: 185 QSSTAAQQASDEARQTNTIVQGLAASSTRIGDVVSLINDIAAQTNLLALNATIEAARAGE 244
            SS  + +AS+EA + N+IV  L+ ++ RIG VV+LINDIAAQTNLLALNATIEAARAG+
Sbjct: 373 NSSEISHRASEEAERVNSIVLSLSEATNRIGQVVTLINDIAAQTNLLALNATIEAARAGD 432

Query: 245 AGKGFAVVAGEVKALANQTGKATEEISTQVGAVQTATREAVAAIGSIVGRIEEINHIATA 304
           AGKGFAVVA EVK LA QT +ATE+I  Q+ +VQ  TR+AV+AIG I   I  I+  A+A
Sbjct: 433 AGKGFAVVANEVKHLATQTARATEDIVVQINSVQAVTRDAVSAIGGIGHTISSISESASA 492

Query: 305 ISAAVEEQSAATAEIARNVDQASQGTRQVSANVGGVSATAAETDAAAVQVLSAAQSLSRE 364
           I++AVEEQ+AATAEIARNV +AS GTR+V++++  V+  AA T +AA Q+L  A  LS++
Sbjct: 493 IASAVEEQTAATAEIARNVQEASSGTREVTSSITLVNQGAATTGSAAHQLLGTADELSQQ 552

Query: 365 ATELKDVVDRFLEGVR 380
           + +L   V  FL  ++
Sbjct: 553 SEQLATEVSEFLAAIK 568