Pairwise Alignments

Query, 384 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 565 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  300 bits (767), Expect = 9e-86
 Identities = 182/372 (48%), Positives = 242/372 (65%), Gaps = 5/372 (1%)

Query: 18  AGIGLIGAMASL----IGKRTIAAPIDAMAAAMDKLRQRDYGVHIPGVGLTNEIGRMASS 73
           AGI L+  + +L    +  R IAAP+  +A    +L ++DY   +      +EIG + ++
Sbjct: 191 AGIALVVCLVALGLVTVLSRDIAAPLRRLAEVAQRLARQDYSAQVEKTERKDEIGLLIAA 250

Query: 74  LAVFRD-AMVETERLTAEHEAELTERVERGRAMDSLARDFDRTVSGVLEVVSGAATELHA 132
           +AV RD A    E   A+ E+  T  ++R +A   LA D + ++  V +VV  A  E+ +
Sbjct: 251 VAVLRDEAASAAEARAAQQESYRTASIQRKQARLQLADDIESSIKRVTDVVVQAVGEMES 310

Query: 133 TAQGMQTIAEQTQDKATAVAAAAEEASSSVETVATAAEELSASIAEIARQVAQSSTAAQQ 192
            A  +     +   KA A A++AE+AS +V TVA AAE+LSASI+EI+RQV +SS  + +
Sbjct: 311 AAAIVSGAVGEAGAKAGAAASSAEQASGNVATVAAAAEQLSASISEISRQVHESSDTSGR 370

Query: 193 ASDEARQTNTIVQGLAASSTRIGDVVSLINDIAAQTNLLALNATIEAARAGEAGKGFAVV 252
           A  EA +TN +VQGLA ++  IG+VV+LINDIA QTNLLALNATIEAARAGEAGKGFAVV
Sbjct: 371 AVAEAERTNALVQGLAEAAGHIGEVVTLINDIAGQTNLLALNATIEAARAGEAGKGFAVV 430

Query: 253 AGEVKALANQTGKATEEISTQVGAVQTATREAVAAIGSIVGRIEEINHIATAISAAVEEQ 312
           AGEVK LA QT KAT+EI  QV  VQ  TREAV AI SI   I  IN IA AI+AAVEEQ
Sbjct: 431 AGEVKHLATQTAKATDEIYNQVNTVQARTREAVDAIASIAATIGRINEIAGAIAAAVEEQ 490

Query: 313 SAATAEIARNVDQASQGTRQVSANVGGVSATAAETDAAAVQVLSAAQSLSREATELKDVV 372
            AATAEIARNV QAS GT++VS+ +G ++A  A   ++A  V   A+ L+ EA  L   V
Sbjct: 491 GAATAEIARNVQQASAGTQEVSSAMGSLAAATASAGSSADSVQGIAKRLTSEAQALDREV 550

Query: 373 DRFLEGVRTVQG 384
            +F+  +R+ QG
Sbjct: 551 HQFMVSMRSDQG 562