Pairwise Alignments

Query, 384 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 603 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  326 bits (836), Expect = 9e-94
 Identities = 186/360 (51%), Positives = 250/360 (69%), Gaps = 1/360 (0%)

Query: 22  LIGAMASLIGKRTIAAPIDAMAAAMDKLRQRDYGVHIPGVGLTNEIGRMASSLAVFRDAM 81
           ++G + S    R+I+AP+ AM  AM+ L   D  +H+P  G  +EIG MA ++ VF+D  
Sbjct: 242 ILGLVLSFFIGRSISAPVIAMTNAMEALAAGDTTIHVPATGNRDEIGDMAKAVQVFKDNA 301

Query: 82  VETERLTAEH-EAELTERVERGRAMDSLARDFDRTVSGVLEVVSGAATELHATAQGMQTI 140
           +    L  E  EA+     +R RAM  +A  F+  V G+++ VS  AT++ A +QG+ + 
Sbjct: 302 IRVAALQTEQAEAKARAEADRRRAMLGMADSFEAQVMGLVKGVSVQATQMEAVSQGVSSA 361

Query: 141 AEQTQDKATAVAAAAEEASSSVETVATAAEELSASIAEIARQVAQSSTAAQQASDEARQT 200
           A Q Q +A  +AAAA +A+ +V+ VA AAEELS+SI+EI RQVA +++ ++QA++E  +T
Sbjct: 362 AHQAQAQAGTIAAAAGQATGNVQAVAAAAEELSSSISEIGRQVADAASISRQAAEETERT 421

Query: 201 NTIVQGLAASSTRIGDVVSLINDIAAQTNLLALNATIEAARAGEAGKGFAVVAGEVKALA 260
           N +V+ LA ++ RI  VVSLI DIA+QTNLLALNATIEAARAGEAGKGFAVVAGEVK LA
Sbjct: 422 NDMVRALAEAAGRIDQVVSLITDIASQTNLLALNATIEAARAGEAGKGFAVVAGEVKNLA 481

Query: 261 NQTGKATEEISTQVGAVQTATREAVAAIGSIVGRIEEINHIATAISAAVEEQSAATAEIA 320
           NQT +ATEEI TQ+GAVQ  TR AV AI +I   I ++  I+  I+ AVEEQSAATAEIA
Sbjct: 482 NQTARATEEIGTQIGAVQEETRRAVEAIRNIGTVIGQVREISGGIADAVEEQSAATAEIA 541

Query: 321 RNVDQASQGTRQVSANVGGVSATAAETDAAAVQVLSAAQSLSREATELKDVVDRFLEGVR 380
           RNV QA QGT+ VS N+ GVS  A+ T AA+ Q+L+ A  L+  +  L+D V RFL+ VR
Sbjct: 542 RNVQQAVQGTQDVSLNIAGVSEAASSTGAASRQMLAGAGELAGNSARLRDEVVRFLDRVR 601