Pairwise Alignments

Query, 702 a.a., excinuclease ABC subunit UvrB from Magnetospirillum magneticum AMB-1

Subject, 671 a.a., excinuclease ABC subunit B from Pseudomonas simiae WCS417

 Score =  788 bits (2035), Expect = 0.0
 Identities = 392/669 (58%), Positives = 504/669 (75%), Gaps = 23/669 (3%)

Query: 21  EFKIVSDYQPAGDQPQAIAELSAGVDADERDQVLLGVTGSGKTFTMAHVIARTRRPALVL 80
           +F++V+ ++PAGDQP+AI ++  G++A    Q LLGVTGSGKTF++A+VIA+  RP LVL
Sbjct: 3   DFQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTLVL 62

Query: 81  APNKTLAAQLYAEMKGFFPDNAVEYFVSYYDYYQPEAYIPRTDTYIEKDSAVNEQIDRMR 140
           APNKTLAAQLY E K FFP+NAVEYFVSYYDYYQPEAY+P +DT+IEKD+++N+ I++MR
Sbjct: 63  APNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMR 122

Query: 141 HAATRALLERRDVILVASVSCIYGIGSVESYARMTVALKVGESIDRSDLLKRLVELQYTR 200
            +AT+ALLER+D I+V +VSCIYG+GS E+Y +M + +  G+ +D+ +LL+RL  LQYTR
Sbjct: 123 LSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLTSLQYTR 182

Query: 201 NDAAFERGTFRVRGDAVEIFPVHYEDRAWRLSLFGDEIEAINEFDPLTGEKTCSLSEVTV 260
           ND  F R TFRVRGD ++I+P   +  A R+ LF DE+E+++ FDPLTGE    L   T 
Sbjct: 183 NDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFTF 242

Query: 261 YPSSHYVTPRPTITQAIKGIKAELKETLERFHAEGKLLEAQRLEQRTNFDLEMLETTGHC 320
           YP SHYVTPR T+  AI+GIK EL E LE   +  KL+EAQRLEQRT FDLEM+   G+C
Sbjct: 243 YPKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGYC 302

Query: 321 KSIENYSRYLTGRRPGDPPPTLFEYLPEDALLIVDESHVTVPQIGGMYRGDFNRKSVLAE 380
             IENYSRYL+GR  G PPPTL++YLP DALL++DESHV+VPQ+G MY+GD +RK  L E
Sbjct: 303 NGIENYSRYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETLVE 362

Query: 381 FGFRLPSCIDNRPLKFEEWELMRPQTVYVSATPGPWEMERTGGVFTEQVIRPTGLIDPVC 440
           +GFRLPS +DNRP++F+EWE + PQT++VSATPG +E E  G V  EQ++RPTGL+DP  
Sbjct: 363 YGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRVI-EQLVRPTGLVDPEI 421

Query: 441 IVRPVEHQVDDLLGEVRQMARLGNRTLVTTLTKRMAEDLTEYMHDNGVRVRYLHSDIDTL 500
            +RP   QVDDLL E+ +   L  R LVTTLTKRM+EDLT+Y+ D+GVRVRYLHSDIDT+
Sbjct: 422 EIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDTV 481

Query: 501 ERIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLRSKTSLIQTIGRAA 560
           ER+EIIRDLRLG FDVL+GINLLREGLD+PE +LVAILDADKEGFLRS+ SLIQTIGRAA
Sbjct: 482 ERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 541

Query: 561 RNIDGRVILYADKMTASLDYALAETNRRREKQQAYNALHGITPEGIRKAVSDVMDSVYEA 620
           RN++GR ILYAD++T S++ A+ ET RRR+KQ A+N  +GITP+G+ K V+D+M+     
Sbjct: 542 RNLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLENGITPKGVFKDVADIMEG---- 597

Query: 621 DYVTVGTGDSGLAHGVG----------------HNLASVKADIEKRMKAAAADLEFEEAA 664
              TV    S    G+                   +      +E++M   A DLEFE AA
Sbjct: 598 --ATVPGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAA 655

Query: 665 RLRDELRRL 673
           + RDE+ +L
Sbjct: 656 QTRDEIGKL 664