Pairwise Alignments

Query, 702 a.a., excinuclease ABC subunit UvrB from Magnetospirillum magneticum AMB-1

Subject, 673 a.a., excinuclease ABC subunit B (NCBI) from Escherichia coli BW25113

 Score =  800 bits (2067), Expect = 0.0
 Identities = 403/672 (59%), Positives = 504/672 (75%), Gaps = 25/672 (3%)

Query: 22  FKIVSDYQPAGDQPQAIAELSAGVDADERDQVLLGVTGSGKTFTMAHVIARTRRPALVLA 81
           FK+ S ++P+GDQP+AI  L  G++     Q LLGVTGSGKTFT+A+VIA  +RP +VLA
Sbjct: 5   FKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLA 64

Query: 82  PNKTLAAQLYAEMKGFFPDNAVEYFVSYYDYYQPEAYIPRTDTYIEKDSAVNEQIDRMRH 141
           PNKTLAAQLY EMK FFP+NAVEYFVSYYDYYQPEAY+P +DT+IEKD++VNE I++MR 
Sbjct: 65  PNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRL 124

Query: 142 AATRALLERRDVILVASVSCIYGIGSVESYARMTVALKVGESIDRSDLLKRLVELQYTRN 201
           +AT+A+LERRDV++VASVS IYG+G  + Y +M + L VG  ID+  +L+RL ELQY RN
Sbjct: 125 SATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARN 184

Query: 202 DAAFERGTFRVRGDAVEIFPVHYEDRAWRLSLFGDEIEAINEFDPLTGEKTCSLSEVTVY 261
           D AF+RGTFRVRG+ ++IFP   +D A R+ LF +E+E ++ FDPLTG+   ++   T+Y
Sbjct: 185 DQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIY 244

Query: 262 PSSHYVTPRPTITQAIKGIKAELKETLERFHAEGKLLEAQRLEQRTNFDLEMLETTGHCK 321
           P +HYVTPR  I QA++ IK EL    +      KLLE QRL QRT FDLEM+   G+C 
Sbjct: 245 PKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCS 304

Query: 322 SIENYSRYLTGRRPGDPPPTLFEYLPEDALLIVDESHVTVPQIGGMYRGDFNRKSVLAEF 381
            IENYSR+L+GR PG+PPPTLF+YLP D LL+VDESHVT+PQIGGMYRGD  RK  L E+
Sbjct: 305 GIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEY 364

Query: 382 GFRLPSCIDNRPLKFEEWELMRPQTVYVSATPGPWEMERTGGVFTEQVIRPTGLIDPVCI 441
           GFRLPS +DNRPLKFEE+E + PQT+YVSATPG +E+E++GG   +QV+RPTGL+DP+  
Sbjct: 365 GFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIE 424

Query: 442 VRPVEHQVDDLLGEVRQMARLGNRTLVTTLTKRMAEDLTEYMHDNGVRVRYLHSDIDTLE 501
           VRPV  QVDDLL E+RQ A +  R LVTTLTKRMAEDLTEY+ ++G RVRYLHSDIDT+E
Sbjct: 425 VRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVE 484

Query: 502 RIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGFLRSKTSLIQTIGRAAR 561
           R+EIIRDLRLG FDVL+GINLLREGLD+PE +LVAILDADKEGFLRS+ SLIQTIGRAAR
Sbjct: 485 RMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 544

Query: 562 NIDGRVILYADKMTASLDYALAETNRRREKQQAYNALHGITPEGIRKAVSDVM------- 614
           N++G+ ILY DK+T S+  A+ ET RRREKQQ YN  HGITP+G+ K V D++       
Sbjct: 545 NVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIA 604

Query: 615 ----------DSVYEADYVTVGTGDSGLAHGVGHNLASVKADIEKRMKAAAADLEFEEAA 664
                       + E D V +      L   +         ++E  M   A +LEFEEAA
Sbjct: 605 KTKAKGRGKSRPIVEPDNVPMDMSPKALQQKI--------HELEGLMMQHAQNLEFEEAA 656

Query: 665 RLRDELRRLEAL 676
           ++RD+L +L  L
Sbjct: 657 QIRDQLHQLREL 668