Pairwise Alignments

Query, 597 a.a., single-stranded-DNA-specific exonuclease RecJ from Magnetospirillum magneticum AMB-1

Subject, 570 a.a., Single-stranded-DNA-specific exonuclease RecJ from Acinetobacter radioresistens SK82

 Score =  265 bits (678), Expect = 3e-75
 Identities = 190/517 (36%), Positives = 279/517 (53%), Gaps = 22/517 (4%)

Query: 49  VGRVLASRGIGLDEAESFLNPTLRDLLPDPGHLKGMDKAVERLVAAVTRGETIGIFGDYD 108
           +  +LA RG+    +E  L   L+ LL     LKG+++AVE +  A+ + + I I GDYD
Sbjct: 25  LAHILARRGVA---SEQELELRLKYLLSPC--LKGLEQAVEIINQAIDQQKKIVIVGDYD 79

Query: 109 VDGATSSALLRNALADMGAKARVYIPDRIKEGYGPNAPALLRLRDEGVA--VVVTVDCGT 166
            DGATS+AL+  AL DMGA     +PDR K GYG   PA+  L        +++TVD G 
Sbjct: 80  ADGATSTALMILALRDMGADVAYLVPDRFKYGYG-LTPAIADLAFTRFTPDLLITVDNGI 138

Query: 167 TAFDALETATRAGLDMIVVDHHVGEAALPAALAVINPNRLDETSPHGHLAAVGVAFLLAV 226
           ++ + ++ A   G+ +I+ DHH+     PAA AV+NPN+L    P   LA VGVAF +  
Sbjct: 139 SSHEGVKQAQDHGMQVIITDHHLTTKETPAAEAVVNPNQLGCNFPSKALAGVGVAFYVLA 198

Query: 227 GLNRGLKAAGWYQSRPAPDLMRWLDLVALGTVCDVVPLVGVNRALVVQGLK-VMAKRANV 285
            L    K A     +   ++ ++LDLVALGT  DV  L   NR LV  GLK +  ++   
Sbjct: 199 NLCSFRKRA----DQSVSNITQYLDLVALGTYADVASLDYNNRILVDAGLKRIQQQQCRP 254

Query: 286 GLAALADVAGVKERP-DSYTLGYVLGPRVNAGGRVGEAELGTRLMSTDNPAEAAEIARQL 344
           G+ AL D+AG +     +  LG+VLGPR+NA GR+   E+G   +   +   A  +ARQL
Sbjct: 255 GILALLDIAGREPAALKAQDLGFVLGPRINAAGRMETMEIGIECLLAPDLENAYPLARQL 314

Query: 345 DGYNKDRQEIEAVVLLDA---IEQVETRPDDGRPLLVAAGENWHPGVIGIVAGRLKERYG 401
           +  N +R++IEA +  +A   +EQ++   ++  P L+   E+WH GVIGIVAGRLKE++ 
Sbjct: 315 NQLNIERRQIEAQMKQEALRYLEQLQLSKENIPPALIMFEEHWHQGVIGIVAGRLKEQFH 374

Query: 402 RVACVVALEGD--QGKGSGRSVPGLDLGSAI--IAARQAGLLRAGGGHAMAAGFTVARDK 457
           R + V A + D    KGS RSV G+ +   I  IA +   L+R  GGHA AAG T+ ++ 
Sbjct: 375 RPSIVFAADEDGIHIKGSARSVEGIHIRDCIEQIAEQYPHLVRYFGGHAAAAGLTIRKEH 434

Query: 458 LTALSDFLAERLQAQLEGDLVPLLELDGALDAGAAGIELVETLAGVGPFGSGNPEPRFAI 517
                    + +    E  L   L  DG L   A  ++ V+ +  +GP+G   P P F  
Sbjct: 435 FLEFKQVFIQLIAGMDETLLSATLWTDGELPVEALVLDTVDLIEKLGPWGQKFPSPVFE- 493

Query: 518 SGARIAKADVVGSGHVRLILTGAGGKRLKAIAFRAAD 554
              ++     +   H++L L    G+ + AIAF A D
Sbjct: 494 GIFKVVDFRWLKETHLKLRLALNNGQVVDAIAFNAKD 530