Pairwise Alignments

Query, 598 a.a., class I poly(R)-hydroxyalkanoic acid synthase from Magnetospirillum magneticum AMB-1

Subject, 560 a.a., Poly(3-hydroxyalkanoate) polymerase 2 from Pseudomonas putida KT2440

 Score =  341 bits (875), Expect = 4e-98
 Identities = 198/565 (35%), Positives = 300/565 (53%), Gaps = 20/565 (3%)

Query: 38  RQAADPTAAAADPLNIGNAFMEMTAKLMSDPAKLVEAN-----LNLWQDYMSLWQNTARR 92
           + A   T   A  +N+ NA + +  + +    + V  +     L+     ++L     R 
Sbjct: 4   KPAKGSTTLPATRMNVQNAILGLRGRDLLSTLRNVGRHGLRHPLHTAHHLLALGGQLGRV 63

Query: 93  MLGEETQPVVAPDSGDRRFKDEMWQENEIFDFIKQSYLLSARWMQGVVKNVEG--LDDHT 150
           MLG+       P+  D RF D  W +N  +    Q+YL    W +   + ++   L+D  
Sbjct: 64  MLGDTPYQ---PNPRDARFSDPTWSQNPFYRRGLQAYLA---WQKQTRQWIDESHLNDDD 117

Query: 151 AKKVDFYTRQFVDAMAPSNFVLTNPEVLRATVETRGENLLKGLNNLLDDLERGKGNLAIK 210
             +  F      DA+APSN +L NP  ++    T G++L++G+ +LLDDL    G    +
Sbjct: 118 RARAHFLFNLINDALAPSNSLL-NPLAVKELFNTGGQSLVRGVAHLLDDLRHNDG--LPR 174

Query: 211 MTDYDAFKVGENIAVTPGKVVFQTDLMQLIQYDPTTPQAFEKPLLILPPWINKFYILDLR 270
             D  AF+VG N+A TPG VVF+ +L++LIQY P + +   +PLL++PP INKFYI DL 
Sbjct: 175 QVDERAFEVGVNLAATPGAVVFRNELLELIQYSPMSEKQHARPLLVVPPQINKFYIFDLS 234

Query: 271 PKNSLIKWAVDQGHTVFVISWVNPDEKLAHKGFGDYMLEGPLAAIDAIEKATGSRQVNAA 330
             NS +++ +  G  VF++SW NPD +    G   Y+ +    A++A    +G+R  N  
Sbjct: 235 ATNSFVQYMLKSGLQVFMVSWRNPDPRHREWGLSSYV-QALEEALNACRSISGNRDPNLM 293

Query: 331 GYCLGGTLLACTLAYLAAKGE-DRIASATFFTTMTDFKDPGELGVFIDEEQLSALETRMN 389
           G C GG  +A    +L AK +  R+ SAT+  ++ D K      +F DE+ + A + R  
Sbjct: 294 GACAGGLTMAALQGHLQAKKQLRRVRSATYLVSLLDSKFESPASLFADEQTIEAAKRRSY 353

Query: 390 QAGFLDGRDMATTFNMMRANDLIWSFVVNNYLLGKDPFPFDLLYWNSDSTRMPAAMHSFY 449
           Q G LDG ++A  F  MR NDLIW++ VNNYLLGK P  FD+LYWN+DSTR+PAA+H   
Sbjct: 354 QRGVLDGGEVARIFAWMRPNDLIWNYWVNNYLLGKTPPAFDILYWNADSTRLPAALHGDL 413

Query: 450 LRKMYQENRLVEPGAIELNGVKIDLGNIKTPLYMLSTREDHIAPWQSTYALTQNVSGPIK 509
           L + ++ N L     +E+ G  IDL  +    + ++   DHI PW + Y     + G  +
Sbjct: 414 L-EFFKLNPLTYASGLEVCGTPIDLQQVNIDSFTVAGSNDHITPWDAVYRSALLLGGERR 472

Query: 510 FVLSASGHIAGVVNPPAANKYCYWTNAKKPKNPEVWLAGATQVEGSWWTDWQKWVEKFAG 569
           FVL+ SGHI  ++NPP   K  Y  N K   +P  W   A + EGSWW  W +W+   +G
Sbjct: 473 FVLANSGHIQSIINPPGNPKAYYLANPKLSSDPRAWFHDAKRSEGSWWPLWLEWITARSG 532

Query: 570 -KQVPARQPGDGKLKAIEAAPGSYV 593
             + P  + G+     +  APG+YV
Sbjct: 533 LLKAPRTELGNATYPPLGPAPGTYV 557