Pairwise Alignments

Query, 598 a.a., class I poly(R)-hydroxyalkanoic acid synthase from Magnetospirillum magneticum AMB-1

Subject, 559 a.a., poly(3-hydroxyalkanoate) polymerase 1 from Pseudomonas putida KT2440

 Score =  365 bits (936), Expect = e-105
 Identities = 194/494 (39%), Positives = 284/494 (57%), Gaps = 9/494 (1%)

Query: 102 VAPDSGDRRFKDEMWQENEIFDFIKQSYLLSARWMQGVVKNVEGLDDHTAKKVDFYTRQF 161
           +APDS DRRF D  W  N ++    Q+YL   + +Q  V + + L      +  F     
Sbjct: 70  LAPDSDDRRFNDPAWSNNPLYRRYLQTYLAWRKELQDWVSSSD-LSPQDISRGQFVINLM 128

Query: 162 VDAMAPSNFVLTNPEVLRATVETRGENLLKGLNNLLDDLERGKGNLAIKMTDYDAFKVGE 221
            +AMAP+N  L+NP  ++   ET G++LL GL+NL  D+    G  +    + DAF+VG+
Sbjct: 129 TEAMAPTN-TLSNPAAVKRFFETGGKSLLDGLSNLAKDMVNNGGMPS--QVNMDAFEVGK 185

Query: 222 NIAVTPGKVVFQTDLMQLIQYDPTTPQAFEKPLLILPPWINKFYILDLRPKNSLIKWAVD 281
           N+  + G VV++ D+++LIQY P T Q   +PLL++PP INKFY+ DL P+ SL ++ + 
Sbjct: 186 NLGTSEGAVVYRNDVLELIQYSPITEQVHARPLLVVPPQINKFYVFDLSPEKSLARFCLR 245

Query: 282 QGHTVFVISWVNPDEKLAHKGFGDYMLEGPLAAIDAIEKATGSRQVNAAGYCLGGTLLAC 341
                F+ISW NP +     G   Y ++    A+DA+   TGS+ +N  G C GG     
Sbjct: 246 SQQQTFIISWRNPTKAQREWGLSTY-IDALKEAVDAVLSITGSKDLNMLGACSGGITCTA 304

Query: 342 TLAYLAAKGEDRIASATFFTTMTDFKDPGELGVFIDEEQLSALETRMNQAGFLDGRDMAT 401
            + + AA GE+++ + T   ++ D     ++ +F+DE+ L A +    QAG L+G +MA 
Sbjct: 305 LVGHYAAIGENKVNALTLLVSVLDTTMDNQVALFVDEQTLEAAKRHSYQAGVLEGSEMAK 364

Query: 402 TFNMMRANDLIWSFVVNNYLLGKDPFPFDLLYWNSDSTRMPAAMHSFYLRKMYQENRLVE 461
            F  MR NDLIW++ VNNYLLG +P  FD+L+WN+D+TR+PAA H   L +M++ N L  
Sbjct: 365 VFAWMRPNDLIWNYWVNNYLLGNEPPVFDILFWNNDTTRLPAAFHG-DLIEMFKSNPLTR 423

Query: 462 PGAIELNGVKIDLGNIKTPLYMLSTREDHIAPWQSTYALTQNVSGPIKFVLSASGHIAGV 521
           P A+E+ G  IDL  +K  +Y L+   DHI PW S Y       G I+FVLS SGHI  +
Sbjct: 424 PDALEVCGTAIDLKQVKCDIYSLAGTNDHITPWPSCYRSAHLFGGKIEFVLSNSGHIQSI 483

Query: 522 VNPPAANKYCYWTNAKKPKNPEVWLAGATQVEGSWWTDWQKWVEKFAG--KQVPARQPGD 579
           +NPP   K  + T A +P +P  W   A +   SWW  WQ W+ + AG  K+ P R  G+
Sbjct: 484 LNPPGNPKARFMTGADRPGDPVAWQENAIKHADSWWLHWQSWLGERAGALKKAPTRL-GN 542

Query: 580 GKLKAIEAAPGSYV 593
               A EA+PG+YV
Sbjct: 543 RTYAAGEASPGTYV 556