Pairwise Alignments

Query, 189 a.a., site-specific integrase from Magnetospirillum magneticum AMB-1

Subject, 298 a.a., tyrosine recombinase XerD from Pseudomonas simiae WCS417

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 22/183 (12%)

Query: 5   KVLSEAEMKRVLAVVAQHGILSTRNRLAVLLSHWAGMRAGEIAALKIMDVVNEGGAVRDR 64
           K LSEA+++ +LA       +  R+R  + + +  G+R  E+ +L +  V    G +R  
Sbjct: 112 KSLSEADVEALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLR-- 169

Query: 65  VHLAATQTKGKRGRTVFINTKLQREIARYLEQREWTDERKPLIRSQKGGHFSPT------ 118
                   KG + R V +  +    + RY+      D R  L+  +      P+      
Sbjct: 170 -----VMGKGSKERLVPMGEEAIVWVERYMR-----DARSELLGGRPSDVLFPSLRGEQM 219

Query: 119 TMVMLFRRIYDEA---GLSDARS-HSGRRSYLTTLANKGVSVFVLQQLAGHQSIQTTQRY 174
           T    + RI  +A   G+  A S H+ R ++ T L N G  + V+Q L GH  + TTQ Y
Sbjct: 220 TRQTFWHRIKHQAKVAGIGKALSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIY 279

Query: 175 VTV 177
             V
Sbjct: 280 THV 282