Pairwise Alignments

Query, 189 a.a., site-specific integrase from Magnetospirillum magneticum AMB-1

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

 Score = 48.1 bits (113), Expect = 1e-10
 Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 16/180 (8%)

Query: 5   KVLSEAEMKRVLAVVAQHGILSTRNRLAVLLSHWAGMRAGEIAALKIMDVVNEGGAVRDR 64
           K LSEA+++ +L        +  R+R  + + +  G+R  E+ +L +  V    G +R  
Sbjct: 112 KSLSEADVEALLQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLR-- 169

Query: 65  VHLAATQTKGKRGRTVFINTKLQREIARYLEQREWTDER---KP---LIRSQKGGHFSPT 118
                   KG + R V +  +    + RY  QR+   E    +P   L  SQ+G   +  
Sbjct: 170 -----VMGKGSKERLVPMGEEAVVWLERY--QRDGRAELLNGRPSDVLFPSQRGEQMTRQ 222

Query: 119 TMVMLFRRIYDEAGLSDARS-HSGRRSYLTTLANKGVSVFVLQQLAGHQSIQTTQRYVTV 177
           T     +     AG+    S H+ R ++ T L N G  + V+Q L GH  + TTQ Y  V
Sbjct: 223 TFWHRIKHHARVAGIDKPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHV 282