Pairwise Alignments

Query, 189 a.a., site-specific integrase from Magnetospirillum magneticum AMB-1

Subject, 387 a.a., DLP12 prophage; predicted integrase (NCBI) from Escherichia coli BW25113

 Score = 40.0 bits (92), Expect = 5e-08
 Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 15/117 (12%)

Query: 58  GGAVRDRVHLAATQTKGKRGRTVFINTKLQREIARYLEQREWTDERKPLIRSQKGGHFSP 117
           G A+ D          GK  + VF++TK  +                P +R  +    S 
Sbjct: 248 GVALNDTACKVLRDQIGKHHKWVFVHTKAAKRA---------DGTSTPAVRKMRID--SK 296

Query: 118 TTMVMLFRRIYDEAGLSDARSHSGRRSYLTTLANKGVSVFVLQQLAGHQSIQTTQRY 174
           T+ +   RR    AG+ D R H  R ++ + L   GV + VLQ++ G +SI+  +RY
Sbjct: 297 TSWLSACRR----AGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRY 349



 Score = 23.1 bits (48), Expect = 0.007
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 26  STRNRLAVLLSHWAGMRAGEIAALKIMDVVN 56
           S ++R+   L H+ G+R  +I+  KI   V+
Sbjct: 78  SDKSRIEFWLEHFEGIRLKDISEAKIYSAVS 108