Pairwise Alignments

Query, 442 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 382 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  111 bits (277), Expect = 4e-29
 Identities = 75/202 (37%), Positives = 110/202 (54%), Gaps = 28/202 (13%)

Query: 86  TISASTEELVSTVQAIARTSELAAANARSVQDVSDEGARSTEAVVSTMQNIVTTVNDAAE 145
           T+SA+ EEL ++++ I +   LA         V+     S E    T             
Sbjct: 58  TVSAAAEELSASIREIGQQIALAG-------QVTGGAVASAEKAQGT------------- 97

Query: 146 RVSRLTEASSSIGASVKQIEQIARQTNILALNATIEAARAGEFGKGFAVVATEVKNLANQ 205
            ++RL+ A + IG     I+ IA QTN+LALNATIEAARAGE GKGFAVVA EVKNLANQ
Sbjct: 98  -ITRLSAAVNRIGEVANLIQDIASQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQ 156

Query: 206 VGQATQEIRSRIDMLTQETAAILTGMGKGAETVREGEQVVLGSVDKMRTVSHEIRDVTTL 265
             +AT+EI ++I  +   T   +  + + A  ++E E V +       +V+  IR     
Sbjct: 157 TAKATEEISAQIGEVQASTVDAVASVAEIAAAIKEVEGVSV-------SVAGAIRQQDAA 209

Query: 266 MQEISEHLAQQRHAAQEIADNL 287
            Q+I+ ++AQ   AA+E+A+ +
Sbjct: 210 TQDIARNIAQTTSAAREVAERI 231



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 34/179 (18%)

Query: 65  GTVTQAVHTLRSIREMSRRMATISASTEELV--STVQAIARTSELA---AANARSVQDVS 119
           GT+T+    +  I E++  +  I++ T  L   +T++A AR  E     A  A  V++++
Sbjct: 96  GTITRLSAAVNRIGEVANLIQDIASQTNLLALNATIEA-ARAGEAGKGFAVVANEVKNLA 154

Query: 120 DEGARSTEAVVSTMQNIVTTVNDAAERVSRLTEA---------------------SSSIG 158
           ++ A++TE + + +  +  +  DA   V+ +  A                     +  I 
Sbjct: 155 NQTAKATEEISAQIGEVQASTVDAVASVAEIAAAIKEVEGVSVSVAGAIRQQDAATQDIA 214

Query: 159 ASVKQIEQIARQTNILALNATIEAARAGEFGKGFAVVATEVKNLANQVGQATQEIRSRI 217
            ++ Q    AR+        + EA   GE        A  V +++  V ++ + ++S I
Sbjct: 215 RNIAQTTSAAREVAERIAEVSEEAGITGE-------RAARVNHISVDVARSIESLKSVI 266



 Score = 28.5 bits (62), Expect = 4e-04
 Identities = 23/135 (17%), Positives = 54/135 (40%), Gaps = 28/135 (20%)

Query: 34  LADKLKTLAEKLENRSRSLLIQSVGMSIHLNGTVTQAVHTLRSIREMSRRMATISASTEE 93
           +A+++K LA +                            T ++  E+S ++  + AST +
Sbjct: 146 VANEVKNLANQ----------------------------TAKATEEISAQIGEVQASTVD 177

Query: 94  LVSTVQAIARTSELAAANARSVQDVSDEGARSTEAVVSTMQNIVTTVNDAAERVSRLTEA 153
            V++V  IA   +     + SV     +   +T+ +   +    +   + AER++ ++E 
Sbjct: 178 AVASVAEIAAAIKEVEGVSVSVAGAIRQQDAATQDIARNIAQTTSAAREVAERIAEVSEE 237

Query: 154 SSSIGASVKQIEQIA 168
           +   G    ++  I+
Sbjct: 238 AGITGERAARVNHIS 252