Pairwise Alignments

Query, 442 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 684 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  117 bits (292), Expect = 1e-30
 Identities = 85/256 (33%), Positives = 129/256 (50%), Gaps = 28/256 (10%)

Query: 79  EMSRRMATISASTEELVSTVQAIARTSELAAANARSVQDVSDEGARSTEAVVSTMQNIVT 138
           + S R  T++ +TE   + VQ +A  +E   +   S+Q++  +  RS E   +     V+
Sbjct: 445 DTSGRATTVAGATELASANVQTVAAAAEELTS---SIQEIGRQVHRSAEISGAA----VS 497

Query: 139 TVNDAAERVSRLTEASSSIGASVKQIEQIARQTNILALNATIEAARAGEFGKGFAVVATE 198
              +A   V+ L      IG  V  I  IA QTN+LALNATIEAARAGE GKGFAVVA E
Sbjct: 498 EAGEAQGTVTGLASMVKKIGEVVILINDIAAQTNLLALNATIEAARAGEAGKGFAVVAGE 557

Query: 199 VKNLANQVGQATQEIRSRIDMLTQETAAILTGMGKGAETVREGEQVVLGSVDKMRTVSHE 258
           VKNLA Q  +AT EI  +I  + Q+T  ++  +G     +RE  ++  G           
Sbjct: 558 VKNLATQTARATDEIGQQISAVQQQTEKVVLAIGDIVAIIREVGEITAG----------- 606

Query: 259 IRDVTTLMQEISEHLAQQRHAAQEIADNLEAAAARSVDDTKAINTVIDISSKASGNLAEM 318
                     I+  + +Q  A QEIA ++E AAA + + +  +  V D +++     AE+
Sbjct: 607 ----------IASAVEEQSAATQEIARSVEQAAAGTTEVSANVGGVQDAANRTGFAAAEV 656

Query: 319 LNEMNLVEMRNAVIHL 334
           L+   ++    A + L
Sbjct: 657 LDASRIMGEEAARLRL 672



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 77  IREMSRRMATISASTEELVSTVQAIARTSELAAANARSV 115
           IRE+    A I+++ EE  +  Q IAR+ E AAA    V
Sbjct: 597 IREVGEITAGIASAVEEQSAATQEIARSVEQAAAGTTEV 635