Pairwise Alignments

Query, 442 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 698 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  120 bits (302), Expect = 1e-31
 Identities = 89/267 (33%), Positives = 147/267 (55%), Gaps = 36/267 (13%)

Query: 65  GTVTQAVHTLRS----IREMSRRMATISASTEELVSTVQAIARTSELAAANARSVQDVSD 120
           G+V + + T+ S    ++  S +MA+ +A T    +TV   A  S+ A+AN  +V   ++
Sbjct: 292 GSVGKVIQTVTSAATQLQVSSTQMASTAAETSAQATTV---ASASQQASANVETVAAATE 348

Query: 121 EGARSTEAV---VSTMQNIVTTVNDAAE----RVSRLTEASSSIGASVKQIEQIARQTNI 173
           E + S   +   V   Q++ +   D A     ++  L+E ++ IG  V  I  IA QTN+
Sbjct: 349 ELSSSITEIAKQVERSQSVASRAQDEAANTNVQIRALSENANKIGEIVNLINDIASQTNL 408

Query: 174 LALNATIEAARAGEFGKGFAVVATEVKNLANQVGQATQEIRSRIDMLTQETAAILTGMGK 233
           LALNATIEAARAG+ GKGFAVVA EVK+LA Q G+AT+EI S+I                
Sbjct: 409 LALNATIEAARAGDAGKGFAVVANEVKHLATQTGKATEEIASQI---------------- 452

Query: 234 GAETVREGEQVVLGSVDKMRTVSHEIRDVTTLMQEISEHLAQQRHAAQEIADNLEAAAAR 293
               V++G    + ++D +  V  E+ +++     ++  + +Q  A QEIA N+E AAA 
Sbjct: 453 --RAVQDGTNNAVHAIDGITKVISEMGEISA---SVASAVEEQAAATQEIARNVEQAAAG 507

Query: 294 SVDDTKAINTVIDISSKASGNLAEMLN 320
           + + + ++ TV + +++ +G  AE ++
Sbjct: 508 TAEVSSSVVTV-EQAARDTGAAAEQIH 533



 Score = 37.7 bits (86), Expect = 1e-06
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 3/115 (2%)

Query: 34  LADKLKTLAEKLENRSRSLLIQSVGMSIHLNGTVTQAVHTLRSIREMSRRMATISASTEE 93
           +A+++K LA +    +  +  Q   +    N  V       + I EM    A+++++ EE
Sbjct: 430 VANEVKHLATQTGKATEEIASQIRAVQDGTNNAVHAIDGITKVISEMGEISASVASAVEE 489

Query: 94  LVSTVQAIARTSELAAANARSVQD---VSDEGARSTEAVVSTMQNIVTTVNDAAE 145
             +  Q IAR  E AAA    V       ++ AR T A    + +  T ++  +E
Sbjct: 490 QAAATQEIARNVEQAAAGTAEVSSSVVTVEQAARDTGAAAEQIHSAATDLSQQSE 544