Pairwise Alignments

Query, 548 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

Subject, 703 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  248 bits (632), Expect = 7e-70
 Identities = 128/248 (51%), Positives = 173/248 (69%), Gaps = 3/248 (1%)

Query: 298 DITAQTLAEQKVATYLAELERSNAELEQFAYVASHDLREPLRMISSYLSLLERRYAPKLE 357
           DI+ +   E +VA  +AEL+RSN ELE FAYVASHDLR+PLRMI+SYL LL +R A   +
Sbjct: 459 DISERKRIEGRVAELVAELKRSNEELENFAYVASHDLRQPLRMINSYLGLLRKRLAASFD 518

Query: 358 GDGLEFLAFARDGAQRMDRLVLDLLDFSRIQRKGSPIVAMDADPLLHQALRHLAPAIEES 417
            +  EF AFA DGA+R+D +++DLL+FSRI ++ +  + +D + ++   +++LA AI + 
Sbjct: 519 QEAEEFFAFASDGARRLDLMIVDLLEFSRIGKQSTREM-LDLNGVVADGMQNLAVAIRDC 577

Query: 418 GGAVEVAEGGEAVRVMGDPDQVIRLFQNLIGNAVKYRAPDRAPLVKVSWQRTGGEWECVV 477
           G  + VA G     + GD  ++ RLFQNLIGNA+KY   +R P+V +S +  G EW   V
Sbjct: 578 GAEISVAPG--LPTIPGDRSELTRLFQNLIGNALKYCPEERKPVVDISCRDGGREWILSV 635

Query: 478 ADNGIGIDPQYFERIFGIFQRLHTPDAYAGTGIGLAICKKIVERHGGRIWVESVPDQGSV 537
            DNGIGI+ +  E++FGIFQR+ + D Y GTGIGLA+C+KI E HGGRIWVESV D GS 
Sbjct: 636 RDNGIGIEAECLEKVFGIFQRMVSRDKYEGTGIGLAVCRKIAEHHGGRIWVESVVDHGST 695

Query: 538 FHFTLPAA 545
           FH  LP A
Sbjct: 696 FHVALPKA 703



 Score = 44.3 bits (103), Expect = 2e-08
 Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 13/184 (7%)

Query: 60  VERQVQAREDLRAILDNMPDIFYRTDTEGRLLMVSRSVEGLLGYTVEEVLGLDSAFFHGS 119
           +ER+ + R  L   +D  P++   TD+ G +   + S     G+  ++V+G        S
Sbjct: 342 LEREARMRR-LSQTVDQNPNMILTTDSRGVIDYANSSFYRFTGFEPDQVIGATPRILK-S 399

Query: 120 DDSRPQLVAAL--EAAGGSIIDYELRLRHKDGRILWASTSSRFYLDAQGRRGGTEGVVRL 177
           D++ P++   L      G     EL  R +DG+  WAS      LD +    G  G+   
Sbjct: 400 DETPPEVFVDLWQTIRAGREWRGELVNRRRDGQTYWASVVISPVLDEESGLCGFVGMQED 459

Query: 178 IEERKRTELYI--------RENQALIQAMLDASSDAIMLFRPDGTLLA-VNEVMAARFGR 228
           I ERKR E  +        R N+ L      AS D     R   + L  + + +AA F +
Sbjct: 460 ISERKRIEGRVAELVAELKRSNEELENFAYVASHDLRQPLRMINSYLGLLRKRLAASFDQ 519

Query: 229 RATE 232
            A E
Sbjct: 520 EAEE 523