Pairwise Alignments

Query, 345 a.a., histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 645 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  102 bits (253), Expect = 4e-26
 Identities = 95/337 (28%), Positives = 152/337 (45%), Gaps = 39/337 (11%)

Query: 30  PVRDGISSLVEAYRRSVREQRRLVRVSDRL-QAQLATVNQELGKRKAEAEDALEDLKAAQ 88
           P  D  S+ +  YR    +  R  R  +R  QAQL   +Q     +   E+  E LK AQ
Sbjct: 317 PFYDQDSAFI-GYRGIGADVTREARAEERARQAQLELADQHAQLERL-VEERTEALKQAQ 374

Query: 89  ESLVQAEKLASLGALVGGVAHEINTPVGIA-----------------LSCASHLADSTGA 131
              +QA ++AS+G L  G+AHEINTP+                    LS A  LA+S   
Sbjct: 375 IEALQASRMASVGQLAAGIAHEINTPIQYVGDNLAFIQSAAEAVFPLLSEARALAESW-- 432

Query: 132 MRKLFEADDISVEDFERFMDT------VKDTTGLILTNVERAAELIR---SFKQVAVDRT 182
             ++ E D    E+F +  D       +++T   +  ++E  A++ R   S K+ +   T
Sbjct: 433 --RVGEGDAGKTEEFLQHYDAAGLDFLMEETLPAVTQSLEGVAQVARIVLSMKEFSHPGT 490

Query: 183 SSERRRFDLATYIRETLFSLGPHLRQAGHTVRLDCPEGIVMDSYPGALSQVLGNFVMNSL 242
           S ++   D+   +  TL       +          P   +++ +PG ++QV  N ++N+ 
Sbjct: 491 S-QKTAVDINRALDSTLVVCRNTWKHVARMETRFDPALPLVNCHPGEMNQVFLNLIVNAA 549

Query: 243 VHGYEPGELGTLSMTVEREGA---DQVRLTYADDGKGIPEDNLGRIFDPFFTTRRGSGGS 299
               E G+   L  T+  E A   D   +  +D G GI ++    IFDPFFTT+    G+
Sbjct: 550 HAIEESGK--PLPGTITAETALCGDWAEIRISDSGTGISDEIAQHIFDPFFTTKEVGKGT 607

Query: 300 GLGLHIVYNLVTGPLGGSVAAESPPGGGTRFTVQLPL 336
           G GL I Y++V    GG +     P  G  FT+++P+
Sbjct: 608 GQGLAICYDVVVNKHGGQIVVGGEPEHGAIFTIRIPV 644