Pairwise Alignments

Query, 345 a.a., histidine kinase from Magnetospirillum magneticum AMB-1

Subject, 1022 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score = 97.8 bits (242), Expect = 1e-24
 Identities = 88/285 (30%), Positives = 126/285 (44%), Gaps = 36/285 (12%)

Query: 81   LEDLKAAQESLVQAEKLASLGALVGGVAHEINTPVGI-----------------ALSCAS 123
            +E LK AQ   +QA +LAS+G L  G+AHEINTP+                   AL+ A 
Sbjct: 735  IEALKRAQREALQASRLASVGQLAAGIAHEINTPIQYVGDNLRFISDSLIKLMSALTAAR 794

Query: 124  HLADSTGAMRKLFEADDISVEDFERFMDTVK---------DTTGLILTNVERAAELIRSF 174
             L    G +  L EA       FE    T K               L  V + A ++ S 
Sbjct: 795  ELGSEVGQIPALAEA----AAKFEAAFRTTKIPFLVAEIPAALSESLDGVAQIARIVLSM 850

Query: 175  KQVAVDRTSSERRRFDLATYIRETLFSLGPHLRQAGHTVRLDCPEGIVMDSYPGALSQVL 234
            K+ +   TSS+    D+   +  TL       + +    R   P    +  + G L+QV 
Sbjct: 851  KEFSHPGTSSKIMT-DINRALDSTLTVSRNVWKHSAEVERNFDPTLPPVLCHAGELNQVF 909

Query: 235  GNFVMNSLVHGYEPGEL---GTLSMTVEREGADQVRLTYADDGKGIPEDNLGRIFDPFFT 291
             N ++N+  H  E       G ++++  R+G   V +T AD G G+PE    RIFDPFFT
Sbjct: 910  LNLIVNA-AHAIESSGKPLPGRITISTGRDGGHVV-ITVADSGTGVPEAIRERIFDPFFT 967

Query: 292  TRRGSGGSGLGLHIVYNLVTGPLGGSVAAESPPGGGTRFTVQLPL 336
            T+    G+G GL I  ++V    GGS+      G G  F V+LP+
Sbjct: 968  TKEVGKGTGQGLAICRDVVMTKHGGSLDLGDNAGDGAVFVVRLPI 1012