Pairwise Alignments

Query, 543 a.a., IS66 family transposase from Magnetospirillum magneticum AMB-1

Subject, 525 a.a., transposase from Pseudomonas simiae WCS417

 Score =  289 bits (740), Expect = 2e-82
 Identities = 185/504 (36%), Positives = 268/504 (53%), Gaps = 36/504 (7%)

Query: 36  DQAVIAHQKLQIEKLNRALYGPRAER----TARLIDQMELVFEELAASATEDEIAAEQAV 91
           D+ VI     +I +L R  +  R+E+     A L+D  +L+  ++AA   E E+ A QA 
Sbjct: 50  DRTVIEKLTHEIAQLKRFKFAKRSEQHSPAQAGLLD--DLIDTDIAA--IEAELEALQAK 105

Query: 92  AKTTNVVAFTRQRPARKPFPDHLPRERLV-EPAPTTCSCCGSDRLRKLGEDVTETLEVIP 150
             +      T+Q+P R   P   PR  +  EP  T C+C     L+++GEDV+E L+  P
Sbjct: 106 PASIE----TKQKPKRTALPPQFPRTLIHHEPDNTQCAC--GCALKRIGEDVSEKLDYTP 159

Query: 151 RQWKVIQRVREKFTCRDCEKISQAPAPFHVTPRGWAGPSLLAMILFEKFGQHQPLNRQAE 210
             + V + +R K+ C DCE + QAP P  +  +G     LLA ++  K+G H PL RQ +
Sbjct: 160 GVFTVERHIRGKWVCDDCETLIQAPVPAQIIDKGIPTAGLLAQVMIAKYGDHLPLYRQEQ 219

Query: 211 RYAKEGVPLSLSTLADQVGAGCAVLEPLIRRIEAHVFAAGRLHGDDTTVPVLAKGKTDTG 270
            + + G+ +  STLA  VG     L+PL+  +   V     +H D+T V VL  G   T 
Sbjct: 220 IFGRAGLAIPRSTLAQWVGTCGVQLQPLVDALRGVVLGHNVVHADETPVQVLMPGAKKTH 279

Query: 271 RCWVYVRDDRPFGGPAPPAAMFYYSRDRGGEHPQGHLASYAGLFQADAYGGYAKVYAPDR 330
           R +V+      F      A ++ ++  R GEH +  L  + G    D +GGY   ++   
Sbjct: 280 RAYVWAYASSAFADIK--AVVYDFTPSRAGEHARRFLQDWKGKLVCDDFGGYKASFSLG- 336

Query: 331 KPGPILEAACWVHARRPFFIMADLAENARRKARGKTTAPVSPLALEAVQRIDALFEIERA 390
               + E  C  HARR FF +     +A  K         S LA +A++ I  L+EIER 
Sbjct: 337 ----VTEIGCMAHARRKFFEL-----HATNK---------SQLAEQALRYIQVLYEIERE 378

Query: 391 INGQTAEQRRAIRLEQSAPLVADLEIWMREQRAKLSRGNDLAKAMDYMLKRWPAFTRFLD 450
           +     + RR IR E++AP +  L  WM  QR ++  G  +AKA DY LKRW A +R+LD
Sbjct: 379 VRDLEPDLRRRIRQEKAAPAMDVLHTWMIAQRERMHDGVAIAKAFDYSLKRWTALSRYLD 438

Query: 451 DGRICLSNNAAERALRGIALGRKSWLFAGSDRGGQRAAAMYSMIVTAKMNDIDPQAWLAD 510
           DG + + NN AE+ +R  ALGRK+WL+AGS R GQRAAA+ S+I +AK+N  DP A+L D
Sbjct: 439 DGAVPIDNNHAEQQIRPWALGRKNWLYAGSLRSGQRAAALMSLIQSAKLNGHDPYAYLKD 498

Query: 511 VLARIAGHSANRIDELLPWNWRSL 534
           V  R+    A+ I ELLP NW  L
Sbjct: 499 VFTRLPTQRASEIAELLPHNWTHL 522