Pairwise Alignments

Query, 177 a.a., transcription termination/antitermination protein NusG from Magnetospirillum magneticum AMB-1

Subject, 167 a.a., transcriptional activator RfaH from Magnetospirillum magneticum AMB-1

 Score = 42.4 bits (98), Expect = 4e-09
 Identities = 35/179 (19%), Positives = 75/179 (41%), Gaps = 29/179 (16%)

Query: 6   WYVIHVYSGFEKKVAQSIREQ---------AEQKGMAEAFEQILVPTEEVVEVRRGAKVN 56
           W+V+H ++  EK  A  ++ Q         ++++  A   E +  P              
Sbjct: 4   WFVVHTHANAEKIAAGHLQRQHFDVYLPQYSKRRSHARKVEWVKAP-------------- 49

Query: 57  AERKFFPGYVLVKMNLTDDTWHLVKNTPKVTGFLGGKGRPVPITEREAERII-KQVQEGV 115
                FP Y+ ++M+     W  +++T  V   +   G PVP+ +   + I  ++   G+
Sbjct: 50  ----LFPRYLFLRMDPDLTPWFSIRSTVGVHSLVCRGGMPVPLGQVIIDEIRGREDDSGL 105

Query: 116 ERPKPSIIFEVGEQVRVSDGPFTSFNGLVEEVDEEKARLKVAVSIFGRSTPVELEYSQV 174
                ++ F  G+++ + +GP     GL + +D+   R+ + + + GR   V +    V
Sbjct: 106 VSLGEAMPFASGQRLEIVEGPLAEQLGLFQGLDDMN-RVVLLLDLLGRQVRVRVPLEAV 163