Pairwise Alignments

Query, 768 a.a., cytochrome c from Magnetospirillum magneticum AMB-1

Subject, 322 a.a., Cytochrome c oxidase polypeptide II (EC 1.9.3.1) from Sphingobium sp. HT1-2

 Score = 48.5 bits (114), Expect = 5e-10
 Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 15/119 (12%)

Query: 559 SHITPEIIEANE-----GDEITVHLTNLERAQDETHGFAISKHNGNLSIEPGKTASLTVK 613
           S   P ++ ANE     G  + + L     AQD  H F I    G + + PG+T  L V+
Sbjct: 127 SRAGPGLVSANEIRLPVGRTVILELG----AQDVIHSFWIPGLAGKMDMIPGRTNRLVVR 182

Query: 614 ANKAGVYPYYCTEFCSALHLEME-GYLLVQPANY-----KATGAKGKEGQIYGQKDYDA 666
           A KAG +   C EFC   H  M    + + PA++      A GA    G   GQ  +DA
Sbjct: 183 AEKAGRFRGVCAEFCGLSHALMAFDVIAMNPADFDAWLADARGAGRGLGSSRGQSLFDA 241