Pairwise Alignments

Query, 581 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

Subject, 430 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  207 bits (527), Expect = 7e-58
 Identities = 151/428 (35%), Positives = 205/428 (47%), Gaps = 26/428 (6%)

Query: 161 DPNLADMLNNMGVALERLERRDEAVPMMRAASLIRPDSPAIHDNLGNALLGTAQAEEAET 220
           DPN+   L   G  L +  + + A+   R A  I         NLGN L    Q  +A  
Sbjct: 12  DPNVWSAL---GALLRQAGKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVEQYADAIA 68

Query: 221 CHRRALALGAKGGETWSNLGNSLHRQGRLDEADAAYRRAIEINPEEPKFHTNLALNLLLA 280
               A+ L        SNL  +L    R + A      A+   P +P    + AL LL  
Sbjct: 69  AQEHAVVLSGGNANLLSNLVVALRHGCRFNRALEILDVALRARPNDPGLLWDRALTLLQV 128

Query: 281 GRMEEGWREYEWRWRGHPNLPPY---LVD-RVWTGEPLPADLPGGGTLLLQAEQGYGDTL 336
           GR  EG+R+Y+ R     +LP Y   + D  +W G PL      G T+LL  EQG+GD L
Sbjct: 129 GRYAEGFRDYDSRL----SLPSYQNRIADGTMWDGGPLD-----GKTILLTTEQGFGDVL 179

Query: 337 QFIRYVPQLKARGVNRVILACQPELIRLMETAPGLDAVVGEAGPMPPFDKAVTLLSLPGL 396
              RY P +KARG  RV+L C PEL RL+    G+D  V    P PP+D    L+SLP  
Sbjct: 180 LTARYAPMVKARG-GRVLLECHPELHRLLSGLEGIDGFVRAGTPYPPYDVHCPLMSLPHR 238

Query: 397 LGG----LAAPAAFPYLSVPQGVRMPLPAAPAGTLKVGLAWAGRPTHGDDWNRSIPARML 452
           LG     +  P      +  +     L   P GT+KVG+ W+GR T  D+  R+      
Sbjct: 239 LGTTIDTVPPPTRLTVTAEAREKAARLVPGPDGTIKVGIIWSGRVTFKDNARRATTLSRF 298

Query: 453 APILDVPGVTFYSLQRGAVAPRLGRPPADRLVEA-ADLCADFCDTAAMLMGLDLIISVDT 511
              L+VP V  YS+Q+G     L       L+        DF DTAA+L  LDL+I  D+
Sbjct: 299 LRFLNVPNVRLYSIQKGPPEAELETLGTSTLITPLGQHFNDFADTAAVLERLDLVIMTDS 358

Query: 512 AVVHLAGALGKPVWLLLPSVPDFRW-RLEGEASD---WYPAFRLFRRKGQSGWEAPIARL 567
           +V HLAG+LG+PVW LL  +P + +   +GE +D   WYP+ RLFR+     W++  A  
Sbjct: 359 SVAHLAGSLGRPVWNLLQFMPYWVYGDGKGEWADTTPWYPSMRLFRQTTPGDWDSVFAAA 418

Query: 568 AEALRARV 575
            +ALR  V
Sbjct: 419 EQALRQLV 426



 Score = 36.6 bits (83), Expect = 2e-06
 Identities = 23/73 (31%), Positives = 37/73 (50%)

Query: 15 LTRLAERLPGDAEVLARLAVMRVRLGGLDGAKACAERAVELAPGLAEAHAALGLVQGRLR 74
          L  + E+ P D  V + L  +  + G  + A AC  RA+E+      A   LG V G + 
Sbjct: 2  LEGMLEQKPRDPNVWSALGALLRQAGKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVE 61

Query: 75 RFSEARLSLEHAV 87
          ++++A  + EHAV
Sbjct: 62 QYADAIAAQEHAV 74



 Score = 28.1 bits (61), Expect = 8e-04
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 8/119 (6%)

Query: 50  ERAVELAPGLAEAHAALGLVQGRLRRFSEARLSLEHAVRINPRLGMAWLHLGEVL---ST 106
           E  +E  P      +ALG +  +  +   A      A+ I+ R   AW +LG VL     
Sbjct: 3   EGMLEQKPRDPNVWSALGALLRQAGKPEAAIACQRRALEIDQRHVGAWTNLGNVLGDVEQ 62

Query: 107 FPDQLQAAAEALRRAGGLMPRDHRPLNALAGVLMGGKRYDDAVQAYRAA-AAMATDPNL 164
           + D + A   A+  +GG    +   L+ L   L  G R++ A++    A  A   DP L
Sbjct: 63  YADAIAAQEHAVVLSGG----NANLLSNLVVALRHGCRFNRALEILDVALRARPNDPGL 117