Pairwise Alignments

Query, 335 a.a., integrase from Magnetospirillum magneticum AMB-1

Subject, 348 a.a., tyrosine-type recombinase/integrase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  141 bits (355), Expect = 3e-38
 Identities = 115/343 (33%), Positives = 163/343 (47%), Gaps = 18/343 (5%)

Query: 1   MKYVTETKPGH----FYYRRNGRYWGRLPGLPGSIEFATEYARLN--ASFADVGKTPAVP 54
           + YV   K  H     YYRR G     LPG PGS EF   YA  +  A  AD   T   P
Sbjct: 6   LAYVQRFKDRHGRIRHYYRRKGYATVGLPGDPGSAEFMAAYALAHGRAPKADPA-TKVQP 64

Query: 55  GTFDAMVEAYLASGEYRQNLKQKTKDAYRYDLDILRT-RFGKFRVADIEVKHVLKMRDFF 113
            + + ++  Y  S ++  +L+ +T+  YR  LD  R   +G      IE +H+  +    
Sbjct: 65  RSINHLMIEYYRSADFL-DLEPQTQKTYRQILDRFRAGAWGGRSAVSIEPQHLNGIFHQM 123

Query: 114 ADKPGKANTLVRTLRVVFGWGIGRGLMKTNPADLKGVNVKKLKIGAHKPWAPAALAKFRA 173
           AD+PG    L + L   F   +  G  K NP  ++    +K K     PW+ A +  F A
Sbjct: 124 ADRPGAQRNLRKRLMKAFAVAVELGWRKDNP--VRETKSRKRKSKGFIPWSEAEIETFEA 181

Query: 174 ---EGQPHLVLAFELGLATGQRQGDLIRLRWDDISDGVVHVAQEKTGKELWLPVSKHLAG 230
              EG     LA  L L TG R+ D++ +    + +G + V Q+KT   +W+PV   L  
Sbjct: 182 KWGEGTRER-LALYLLLYTGVRRSDVVGMGQQHVKNGRIAVTQDKTDVPIWIPVHPRLKA 240

Query: 231 VLARAPRQAVTVLVNSRGTPWIKANPLAQAFGAEITRLGLDGLVFHGLRKTAAVALADVG 290
            +AR     +T ++   G P+  A      F    T  G+ G   HGLRK A   LA+ G
Sbjct: 241 EIAR-HGAGMTFILTQYGRPFSPAG-FTSWFVERATLAGVTGRTPHGLRKAAGRRLAEAG 298

Query: 291 CSTKQIAAVTGQSD-QMVEHYTRGADQKRLAKAAVVKLERSGK 332
            +TK+IAAV G +    VE YTR ADQ +LA  A+ KLE++ K
Sbjct: 299 ATTKEIAAVLGHTSLDEVETYTRSADQAKLADTAIAKLEKAEK 341