Pairwise Alignments

Query, 344 a.a., membrane protein from Magnetospirillum magneticum AMB-1

Subject, 296 a.a., flagellar motor protein MotB from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  227 bits (579), Expect = 3e-64
 Identities = 139/330 (42%), Positives = 193/330 (58%), Gaps = 38/330 (11%)

Query: 1   MAEGGQQIIIKRVKKVAGGAH-GGAWKVAYADFVTAMMAFFLLLWLLNAVTEEQLTGVSN 59
           M+   + I+IK+VKKV+GG H GGAWKVAYADFVTAMMAFFLL+WL+N    EQ  G++ 
Sbjct: 1   MSVSDRPILIKKVKKVSGGGHHGGAWKVAYADFVTAMMAFFLLMWLINTTDPEQKRGIAE 60

Query: 60  YFAPTMASKSSSGAGGLLGGKVIGEGAQVSNTSSPSLVQHLPPASIGPGGEDLTGSKEFA 119
           YFAP   S+++SG+GG+LGG  +G+   V +  S S+++ L P +      D TGS   +
Sbjct: 61  YFAPASVSETTSGSGGILGGTSLGDDG-VKSAGSQSVLEELAPEA---PATDQTGS---S 113

Query: 120 PENEGDSSLGPGKGAGQGEGQGAGQGKDRSGMSEQEFKEAQAQREQQKFDKAKEVLEGAM 179
             +  DS+L       Q E Q                     +RE  +F  A E L  AM
Sbjct: 114 LSSASDSAL-------QAEIQ---------------------KREAAEFASAAESLRQAM 145

Query: 180 KGIPEMKQFQGSMLVDNTPEGLRIQITDQEGLAMFPSGSSAPYGHTRAMLDLVSRVVRQL 239
           + +PE+ +    ++VD TPEGLRIQ+ DQEG +MF + S+ P    + +L  V++V+ QL
Sbjct: 146 QSMPELAELSKQLIVDQTPEGLRIQLVDQEGRSMFDNNSARPNARAQVLLRAVAKVINQL 205

Query: 240 PDNRIAISGHTDAIPFRD-PSGYTNWELSADRALATRRALIASGVPEGRIDRIVGRADQE 298
           P NRI+I+GHT A P     S   +W LS++RA  +R  L  SGV   R+  + G+A  +
Sbjct: 206 P-NRISITGHTSAAPGSSRASAPADWTLSSERANGSRLVLQGSGVDPDRVYSVAGKAGSD 264

Query: 299 PLDKADPKGLRNRRISIILLRENDVGPVDS 328
           PL   DP    NRRI+I+LLRE  V P D+
Sbjct: 265 PLYPDDPTLAGNRRIAIVLLREAPVLPSDT 294