Pairwise Alignments

Query, 414 a.a., lipoprotein-releasing system transmembrane subunit LolC from Magnetospirillum magneticum AMB-1

Subject, 414 a.a., multidrug ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  254 bits (648), Expect = 4e-72
 Identities = 147/415 (35%), Positives = 236/415 (56%), Gaps = 5/415 (1%)

Query: 2   IFNSFERMVAFRYLRARRKEGFISVIAGFSLAGIGLGVATLIVVMAVMNGFRHELLGRIL 61
           +F      +  RY RA+R+  F+S I+  S+ G+ LGV  +IVV++VMNGF+ E+  RIL
Sbjct: 1   MFRPLSIFIGTRYTRAKRRNRFVSFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60

Query: 62  GINGHIGVYGSGAPLSGYDPLADSIRKLPGVTRVIPTAEGQVFATSSGGGTGAIVRGVR- 120
           G+  H  + G   P+  + P+A +  K P VT  +P  +     +  G      + G+  
Sbjct: 61  GMVPHATIVGVN-PIDDWQPVAAAAMKNPQVTAAVPFTQMDGMFSYKGAMQPIEISGIDP 119

Query: 121 GQDLLTRPVFQKKYRGNPADFA-GDDAVVIGKRLADKLGVRIGDSISLISPKGNVTAFGT 179
            Q+     V Q   RG   D   G+  VV+G+  A +  + +GD ++LI P+ +    G 
Sbjct: 120 AQEGKVSIVAQHIVRGKLDDLKPGEFGVVVGEITARRFRLNVGDKLTLIVPEISTAPGGI 179

Query: 180 VPRMRGYRVVGTFDVGMFEYDSGFIFMPL-EAAQTYFRLPEQVTQIEVFLENPDMVPETR 238
            PRM+   VVG F VG  E D     + + +AA+     P QV  + + +++    P+  
Sbjct: 180 TPRMQRLNVVGIFKVGA-ELDGSMAMIHMADAAEIQHWQPNQVQSVRLAVKDLYAAPKVS 238

Query: 239 KAIWDLTGTTATIYDWQQANANFFNAIQVERNVMFLILTLIILVAAFNIISSLIMLVKDK 298
             I    G      DW     + F+A+++E+ ++ L+L +I+ VAAFNII++LIM+V DK
Sbjct: 239 SDIAASLGAAYKPDDWTHTQGSLFSAMKMEKTMIGLLLLMIVAVAAFNIIATLIMVVNDK 298

Query: 299 GRDIAILRTMGATRGMILRIFFLAGASVGVVGTVAGTVLGVAFATNIENIRQFIQSIIGR 358
           G DIAILRT+GAT   I+ IF + G  +G+VGT+ G VLGV  A N+  +  +++ + G+
Sbjct: 299 GADIAILRTIGATPRQIMAIFMVQGTVIGIVGTLIGGVLGVIAALNVSELVGWVERVTGQ 358

Query: 359 ELFAAEIYFLTQLPARVETREVVTVVLMALGLSFAATIYPAWRAAKLDPVEALRY 413
            +F++++YF++ LP+ ++  +VV +      LSF AT+YPA+RAAK++P  ALRY
Sbjct: 359 HIFSSDVYFVSNLPSELQGGDVVLICTAGFVLSFLATLYPAYRAAKIEPAHALRY 413