Pairwise Alignments

Query, 258 a.a., exodeoxyribonuclease III from Magnetospirillum magneticum AMB-1

Subject, 270 a.a., exodeoxyribonuclease III / apurinic/apyrimidinic endodeoxyribonuclease VI from Pseudomonas putida KT2440

 Score =  151 bits (382), Expect = 1e-41
 Identities = 92/269 (34%), Positives = 139/269 (51%), Gaps = 14/269 (5%)

Query: 3   LRIATWNVNSVRARLGNVLDWLGSFAPDVVLLQEIKCQDQDFPLLEIQAAGYHAAVHGQK 62
           ++I  +N+N +RAR   +   +    PDV+ LQE K  D  FPL ++QA GYH   HGQK
Sbjct: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60

Query: 63  SYNGVAILSRHPMSDVRTRLSGDDSDEQARYIEATIGGWRLASLYLPNGNPAPGDKFDYK 122
            + GVA+LSR P   +    + D+ D Q R+I  T      + + + NG    G+  D+ 
Sbjct: 61  GHYGVALLSRQPPLSLHKGFATDEEDAQRRFIWGTFADANGSPITIMNGYFPQGESRDHP 120

Query: 123 LAWMARLRTHA--QALLAQGI----PFVLGGDFNICPTDDDVYDPP----KWRDDALCR- 171
             + A+ R ++  QALL        P ++ GD NI P D D+   P    +W     C  
Sbjct: 121 TKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180

Query: 172 -PDSRAAWRSIVNLGLTEAFRALHPGEKGRYSFWDYQAGAWQRD--EGLRIDHFLLSPQA 228
            P+ R     +   GL ++FR L+P    R+S++DY++  ++ +   GLRID  + S Q 
Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLYPDVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQL 240

Query: 229 ADCLHACEIDKAPRGKEKASDHTPVWIEL 257
              + A  +D   RG EK SDH P+W+EL
Sbjct: 241 VPRIKAAGVDYELRGMEKPSDHAPIWLEL 269