Pairwise Alignments

Query, 468 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

Subject, 441 a.a., hemolysin D from Pseudomonas simiae WCS417

 Score =  143 bits (360), Expect = 1e-38
 Identities = 108/418 (25%), Positives = 193/418 (46%), Gaps = 10/418 (2%)

Query: 57  RFTMLLASTTTAAFVVWASFTDVPEIATAEGQIIPTGQVQAVQHLEGGIVQDILARDGDL 116
           R   LL     A F+ WA+   + +     G+++ +G  + VQH  GGIV+ I  RDGD+
Sbjct: 26  RLGWLLVLGGFAGFLGWAALAPLDKGVAVPGKVMVSGHRKTVQHPAGGIVERIDVRDGDV 85

Query: 117 VEAGAPIVRLNAAQAISDLEQTRAREATLLIKAERLRALAEERQ-----PDFSNMPKGYD 171
           V AG  ++RL      + ++  R++    L    RL A +E        P+  N P+   
Sbjct: 86  VSAGQVLLRLKETPLRAQMQSLRSQYLASLASEARLSAESEGLSAIRFGPELLNDPEAAG 145

Query: 172 RLMSDNMAIFNSQSQARDTSRSVILSQMEQKRSDLRLLESQERSLREQLGPLQEEMTMRQ 231
            L S    +FNS++QA  T +  +   +    + LR     + S   Q   L E++   +
Sbjct: 146 TL-SLQRQLFNSRAQALATEQQGLRETIAGAEAQLRGTRDSQASKVHQRAALNEQLQGLR 204

Query: 232 ELVAKGLVSRVVFLDTKRELSRVQGELARLIGQEVTAREALSEVENRLMDNKSSLQKSTM 291
           EL  +G + R   LD++R  S++ G +A   G+    +  + E+  R+       QK   
Sbjct: 205 ELAREGYIPRNRLLDSERLYSQIDGAIAEDYGRIGQLQRQVMELRLRIRQLGEDFQKDLR 264

Query: 292 DDLGTTINELAQVQESIGRLEDRVARLEIIAPVRGLVKGLTVKNQGAVIQAGGNVCEVVP 351
             L  T      ++  +   E  +A   + AP  G+V GL V  +G VI+ G  + ++VP
Sbjct: 265 GQLAETRTRSDDLRNRLASAEFELANSLVRAPASGVVVGLDVYTEGGVIKPGQALMDIVP 324

Query: 352 VETQMKVDAKINTKDVGHLKIGQPVRVKVTTYDFARYGAVDGTLTKISASSFADEK-GNP 410
               + V+A++  + V  +  G PV +  + ++ +    V G +T +SA    DE+   P
Sbjct: 325 QGEPLLVEARVPVQMVDKVHPGLPVELMFSAFNQSTTPRVAGEVTLVSADRQVDERTDEP 384

Query: 411 FFKGVIDLKHNYVGLTP-GRYGIQPGMSVTAEIITGDKTLLQYMLKPIFTQIQQSFHE 467
           ++   +  + +  G+       I+PGM V   + TG++++L Y+ KP+  +   +  E
Sbjct: 385 YY--TLRAQVSAAGMQQLDGVQIRPGMPVETFVKTGERSMLNYLFKPLMDRTHMALVE 440