Pairwise Alignments

Query, 668 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

Subject, 626 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  219 bits (559), Expect = 2e-61
 Identities = 143/382 (37%), Positives = 208/382 (54%), Gaps = 14/382 (3%)

Query: 286 LTVLASFGWAFHVRRQQRAVRLVAESEERYRALMETAPMAVVVHRDGVILFANTQATRTV 345
           L  L  +G A  V   Q     +A+ +   R LM++ P  +             +A  + 
Sbjct: 252 LAYLLIYG-ALFVSGVQTPYTALAKEQALLRTLMDSVPDLIFFKDPQSRYLGYNRAFASY 310

Query: 346 RAPAGETLIGRKVLDFVFPDDRADVAARMGAAMADPETVVGGP-VRYVARDGRVVECEVI 404
                  +IG+   +F  P+      ++  AAMA          + Y   DGR V  E I
Sbjct: 311 CGRPEAEMIGKTDDEFAPPEVAEFYRSKDRAAMAAGRPTTNEEWIDYP--DGRHVLLETI 368

Query: 405 TTRVTLDGEP--AVLSVVLDVSQRNQAERERERLLESLQRSNEDLQQFAYIASHDLQEPL 462
              +  +G     ++ +  D+++R+ AE       E L+R+  DL+    +A+HDLQEP 
Sbjct: 369 KAPIHENGGTLMGMVGISRDITRRSSAE-------EKLRRALSDLEMVTTVAAHDLQEPA 421

Query: 463 RNVAGYVQLLGRRYRGRLDKDADDFIAFAVQGTKRMQEMIANLLDYSLLHREDGEPACVD 522
           R +A ++QLL  RYRG+L +DAD +IA+AV G  RM++ +A L +Y+L+ +       VD
Sbjct: 422 RTIASFLQLLELRYRGKLGEDADQYIAYAVAGAHRMRDQLAGLQEYTLVDQGPAFFPPVD 481

Query: 523 SRGPLDEALADLGAAMDESGAVVEVVGVMPVVLARRVELARIFLNLIGNAIKYRRADTVP 582
           +   +   L      +DE+GAVV + G +PVV A   +L  +F +LIGNA+K+R  D  P
Sbjct: 482 AAEIVAAILEAWKPKLDEAGAVVSL-GSLPVVQANPDQLKALFQHLIGNALKFRHPDRPP 540

Query: 583 RIRIFARRDGLTWVFSVADNGIGMEPAYLDRIFTLFQRLHSRETYDGTGIGLAICRKLVQ 642
            IR+ A   G TW FSV DNGIG+E AY D+IF +FQRLH    Y+GTGIGLAICRK+V+
Sbjct: 541 EIRLSAAHQGGTWEFSVTDNGIGVEEAYWDKIFMVFQRLHPLSLYEGTGIGLAICRKIVE 600

Query: 643 HNGGRIWAESEPGQGSTFHFSL 664
            +GGRI   S P QGSTF F++
Sbjct: 601 RHGGRIRVVSVPNQGSTFSFTI 622