Pairwise Alignments

Query, 668 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

Subject, 542 a.a., Signal transduction histidine kinase regulating C4-dicarboxylate transport system from Magnetospirillum magneticum AMB-1

 Score =  155 bits (391), Expect = 6e-42
 Identities = 92/244 (37%), Positives = 140/244 (57%), Gaps = 9/244 (3%)

Query: 425 QRNQAERERERLLESLQRSNEDLQQFAYIASHDLQEPLRNVAGYVQLLGRRYRGRLDKDA 484
           +R   E+  ER    L  +N +L++F++I +HDLQEPLR++  + QL+ R    +L  + 
Sbjct: 291 RRVTLEQLVERRTRELSNANRELERFSFIVAHDLQEPLRSILSFSQLVERGMADQLTPEQ 350

Query: 485 DDFIAFAVQGTKRMQEMIANLLDYSLLHREDGEPACVDSRGPLDEALA----DLGAAMDE 540
             +++      + M+ ++ ++  Y      +G       +   DEALA     L   +++
Sbjct: 351 RGWLSSLGAAARLMKALLHDVQIYL----GEGNAPLPKRQLEADEALAIARRKLKRVIEQ 406

Query: 541 SGAVVEVVGVMPVVLARRVELARIFLNLIGNAIKYRRADTVPRIRIFARRDGLTWVFSVA 600
           SGA +E    +PVV A    L+ +F +LI NAI+YR  D VP I++ +R DG      VA
Sbjct: 407 SGATIEAE-TLPVVWADHHRLSEVFRSLIANAIEYRADDRVPVIKVSSRTDGAFQYIEVA 465

Query: 601 DNGIGMEPAYLDRIFTLFQRLHSRETYDGTGIGLAICRKLVQHNGGRIWAESEPGQGSTF 660
           DNGIG+E  Y +RIF +FQRLH+R ++ GTG+GLAI +K+V+H GG I   S  GQGS F
Sbjct: 466 DNGIGIEEIYFERIFGVFQRLHARSSHPGTGMGLAIAKKMVEHLGGTIRVRSVVGQGSVF 525

Query: 661 HFSL 664
              L
Sbjct: 526 SIVL 529



 Score = 87.4 bits (215), Expect = 2e-21
 Identities = 85/322 (26%), Positives = 134/322 (41%), Gaps = 21/322 (6%)

Query: 14  WQKLSTWLPLLVAALITACSGLVLLKVYALQAERRHEAARAELLSQLSVLRARLEYNLTA 73
           W +++T + L+ AA +   + +V     A+  + R    R ++ +  +     L   L+ 
Sbjct: 19  WNRIATTMVLVAAAWLGLSAWIV-----AIYGDYRETQLRGQVSALAASASGALGNALSQ 73

Query: 74  PLLISRGLVAQIVYHDGMSDADFRRAASLVIRDYDSIRNLTMSRGTVISSVYP-EAPNRA 132
            L   RGL A +    G  + DF   A+   +    IRN++++   V+  VYP +A N  
Sbjct: 74  RLAQVRGLAAFVAVKPGEIEKDFPFFAAAYYQQVPGIRNISVAPDFVVRMVYPTDAGNLK 133

Query: 133 ALGVDYRT--KPDQWPTVQQAITSRKPVVAGPVNLIQGGAALIGRVPVYLPDPAGGESRL 190
            +G       +P     V +AI +R   V  PV +IQGG  L  R  V++     G   +
Sbjct: 134 VIGNHLLEDKRPGFADAVNRAIQTRGLAVHEPVEMIQGGLGLAARHAVFVDGRPWGAVGM 193

Query: 191 FGLISVVIDMPKVFLASGLDARLLPMELALRGRDGLGRSGEMIWGDEAVFLRSPVEMEVT 250
              IS ++D  ++      D     +  A         +G ++ GD  +F   PV + V 
Sbjct: 194 IFNISTLLDSSRI---GAQDKYAWGLRTA---------AGTLVGGDPGIFAMRPVLVRVD 241

Query: 251 LPDGTWAMAAIPKGGWA-ASDGQLRVTAGMGAVLFLLTVLASFGWAFHVRRQQRAVRLVA 309
           LP+G W  A  PK GWA AS     V A    +L L   L S  WA   RR      +  
Sbjct: 242 LPEGYWEFAMAPKTGWAQASAEGAEVKALQFGLLILGIGLLSLTWAALRRRVTLEQLVER 301

Query: 310 ESEERYRALMETAPMAVVVHRD 331
            + E   A  E    + +V  D
Sbjct: 302 RTRELSNANRELERFSFIVAHD 323