Pairwise Alignments

Query, 668 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

Subject, 951 a.a., two-component system sensor histidine kinase RcsC from Erwinia tracheiphila SCR3

 Score = 99.4 bits (246), Expect = 7e-25
 Identities = 95/390 (24%), Positives = 172/390 (44%), Gaps = 41/390 (10%)

Query: 281 AVLFLLTVLASFGWAFHVRRQQRAVRLVAESEERYRALMETAPMAVVVHR--DGVILFAN 338
           + +FL T+   F     +  ++ A RL  E E+  R ++ +AP+ + + R  DG  + +N
Sbjct: 327 SAIFLFTLALLFERRMFLPAEENAQRL-EEHEQFNRKIVASAPVGICILRTSDGTNILSN 385

Query: 339 TQATRTVRAPAGETLIGRKVLDFVFPDDRADVAARMGAAMADPETVVGGPVRYV-ARDGR 397
             A                 L  +  +DR  +           E + G  V +V    G 
Sbjct: 386 ELA--------------HNYLSMLTQEDRQRLT----------EIISGQQVNFVDVLTGS 421

Query: 398 VVECEVITTRVTLDGEPAVLSVVLDVSQRNQAERERERLLESLQRSNEDLQQFAYIASHD 457
               ++         E   + V++DVS R + E   + +  + +++++    F    SH+
Sbjct: 422 NTNLQISFVHSRYRNENVAICVLVDVSARVKMEESLQEMAHAAEQASQSKSMFLATVSHE 481

Query: 458 LQEPLRNVAGYVQLLGRRYRGRLDKDADDFIAFAVQGTKRMQEMIANLLDYSLLHREDG- 516
           L+ PL  + G + LL  +    L K  D  +      +  + ++I+++LD+S +  E   
Sbjct: 482 LRTPLYGIIGNLDLLQTK---SLPKGVDSLVTAMNNSSSLLLKIISDILDFSKIESEQLR 538

Query: 517 -EPACVDSRGPLDEALADLGAAMDESGAVVE--VVGVMPVVL-ARRVELARIFLNLIGNA 572
            EP     R  +    +   A + +    +   + G +PV L    + L ++  NL+ NA
Sbjct: 539 IEPREFSPREVITHITSSYLAMVVKKRLTLWCFIDGDVPVTLEGDPIRLQQVISNLLNNA 598

Query: 573 IKYRRADTVPRIRIFARRDGLTWVFSVADNGIGMEPAYLDRIFTLFQRLHS--RETYDGT 630
           IK+     +  ++ + + DG   VF V D G+G+    + R+F  F ++ S  +  + GT
Sbjct: 599 IKFTHTGGI-MLQSYVK-DGYL-VFCVRDTGVGIPAKEIPRLFDPFFQVGSGVQRNFHGT 655

Query: 631 GIGLAICRKLVQHNGGRIWAESEPGQGSTF 660
           G+GLAIC KL+    G I  +SEPG GS F
Sbjct: 656 GLGLAICEKLINMMDGDIEVDSEPGMGSQF 685