Pairwise Alignments

Query, 417 a.a., D-alanyl-D-alanine carboxypeptidase from Magnetospirillum magneticum AMB-1

Subject, 400 a.a., D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a from Escherichia coli BL21

 Score =  154 bits (389), Expect = 5e-42
 Identities = 87/245 (35%), Positives = 142/245 (57%), Gaps = 7/245 (2%)

Query: 25  AARAESAAFLAVDLGSGAVIAESRGGAPHHPASLTKMMTAYVAFAAIKAGKVSQDDVITV 84
           A   ++ A++ +D  SG V+AE        PASLTK+MT+YV   A+KA K+   D++TV
Sbjct: 34  APSVDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTV 93

Query: 85  SERA------ASQGGASLDLRPGERITLGAALKAMIVRSANDAAVAVAEHVGGSESAFAS 138
            + A      A +G + + L+PG+++++    K +I++S NDA +A+A++V GS+ +F  
Sbjct: 94  GKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIG 153

Query: 139 RMTEEAARLGMTSSSFRNASGMTAGGHVSSPRDMAVLAMAIERDFPTFRPLFSSRDTTWK 198
            M   A +LG+T+++F+   G+ A G  S+ RDMA+L  A+  D P    +   ++ T+ 
Sbjct: 154 LMNGYAKKLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFN 213

Query: 199 GRVLPTVNGFL-GAYAGAEGMKTGFTCSAGYNLVAIAHRGGRRALAVVMGAESSAQRLGA 257
               P  N  L  +    +GMKTG T  AGYNLVA A +G  R ++VV+GA++   R   
Sbjct: 214 KIRQPNRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNE 273

Query: 258 IRRLM 262
             +L+
Sbjct: 274 SEKLL 278