Pairwise Alignments

Query, 425 a.a., DUF4113 domain-containing protein from Magnetospirillum magneticum AMB-1

Subject, 422 a.a., DNA polymerase V subunit UmuC (NCBI) from Escherichia coli BW25113

 Score =  304 bits (779), Expect = 3e-87
 Identities = 178/426 (41%), Positives = 246/426 (57%), Gaps = 8/426 (1%)

Query: 3   VYALVDCNNFYVSCERAFNPALEGKPVIVMSNNDGCAVARSAEAKAIGVGMGEPAFKLRH 62
           ++AL D N FY SCE  F P L GKPV+V+SNNDGC +AR+AEAKA+GV MG+P FK + 
Sbjct: 1   MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60

Query: 63  LVDSHGLIMLSSNYALYGDMSERVMSVLATFSPGAEIYSIDECFLDLDGM-PVDNLTAWS 121
           L    G++  SSNY LY DMS RVMS L   SP  EIYSIDE F DL G+    +LT + 
Sbjct: 61  LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120

Query: 122 QQVRATVRRWTGIPVSVGIGTTKTLAKLANRLAKK-SKKANGVLDLSRDARWIEAALKQT 180
           +++RATV + T + V VGI  TKTLAKLAN  AKK  ++  GV+DLS   R     +   
Sbjct: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ-RKLMSAL 179

Query: 181 PVGDVWGIGRQYAALCGVNGIRTAFDLTLQPDGWIKKTMGAVGLRTVMELRGTPVHTLDT 240
           PV DVWGIGR+ +      GI+T  DL      +I+K    V  RTV ELRG P   L+ 
Sbjct: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239

Query: 241 APSDKHTTCCSRSFGASVTEFEQVHDAVMTFASRAAEKIRGEGLVSGAVQVFAYTDRFRP 300
               K    CSRSFG  +T++  +  A+ ++A+RAAEK+R E      +  F  T  F  
Sbjct: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299

Query: 301 DQPQFSLNSMIRLSPPTSSTPHIIGAALKGLKSAWRDGYEYKKAGVIMLDLVRPEDIPRD 360
           ++P +  ++ ++L  PT  +  II AA + L + W+ G+ Y+KAGV++ D         +
Sbjct: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359

Query: 361 LFSPPPESGARPTA--LMAAVDGINGKMGKGAVGFGLVPDDAPWKMRCSNRTPSFTTSWD 418
           LF    ++  RP +  LM  +D +N K G+G + F        W+M+ +  +P +TT   
Sbjct: 360 LFD---DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSS 416

Query: 419 DIPVVK 424
           D+  VK
Sbjct: 417 DLLRVK 422