Pairwise Alignments

Query, 153 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

Subject, 773 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score = 48.1 bits (113), Expect = 3e-10
 Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 7/129 (5%)

Query: 31  DEVKAIAVKAADFIAAKGVDEAAKAFTTEG----EFKFGEIYVNVIDAQGNWVIYPPKPE 86
           DE  A+A    D    +  +E  K   TE      F  G+ Y  +    G+ V+ P  P 
Sbjct: 109 DEAHALAQAIYDQEKGRRSEEDIKRLITEALRPLRFFDGKGYFFIDGMDGSCVLLPIGPS 168

Query: 87  NKGKSVLNFIDEDGKELGKDILNTGLK--GEGWTEYRWKNPA-TNTIQPKITYVKKVPGK 143
            +G S+LN  D+ G  + + ++    K  GEG++ YRW  P     +  KI YV+     
Sbjct: 169 REGSSLLNNRDDTGHYIMRGLIEAARKPVGEGYSRYRWYAPGDPEKMAAKIAYVRHFAPF 228

Query: 144 DLIAYVGIY 152
           D +   G Y
Sbjct: 229 DWLIGTGQY 237



 Score = 46.6 bits (109), Expect = 9e-10
 Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 5/95 (5%)

Query: 62  FKFGEI---YVNVIDAQGNWVIYPPKPENKGKSVLNFIDEDGKELGKDILNTGLKGEGWT 118
           F+FG     Y+ VID +   ++ P +P N+GK+V + ++ + +   + I+  G KG+G+ 
Sbjct: 256 FRFGRDASGYIVVIDDRERILVSPSRPWNEGKTVSD-LEPEQRNAARPIVEQGRKGDGFI 314

Query: 119 EYRW-KNPATNTIQPKITYVKKVPGKDLIAYVGIY 152
            Y W +   +  +  K++YV ++   +     G+Y
Sbjct: 315 RYDWAREGGSGAVSTKLSYVSRLEDWNWTLAAGVY 349