Pairwise Alignments

Query, 481 a.a., uptake hydrogenase from Magnetospirillum magneticum AMB-1

Subject, 567 a.a., Uptake hydrogenase large subunit (EC 1.12.99.6) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  161 bits (407), Expect = 6e-44
 Identities = 154/565 (27%), Positives = 234/565 (41%), Gaps = 102/565 (18%)

Query: 5   STRLIVGPFNRVEGDLEVTLDVQDGRVAEARVNAPLYRGFEQILLGRPPSDALVIAPRIC 64
           S R+ + P  R+EG L +  ++++G V++A  +  ++RG E+I+  R P DA +I  RIC
Sbjct: 2   SQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEIVKNRDPRDAWMIVQRIC 61

Query: 65  GICSVSQSVASARALAGLGPAAMPENGTLATNLILACENAADHLTHFMLFFA-------- 116
           G+C+ + +++S RA        +P N     N+ILA     DH+ HF    A        
Sbjct: 62  GVCTTTHAISSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIVHFYQLSALDWVDITS 121

Query: 117 -----PDLARSCYGG-RPWFAAARRRF-----------AAGD---------GECARALLP 150
                P+ A +   G   W   + + F           A+G          G  A  L P
Sbjct: 122 ALKADPEKASAMLDGVSSWHLNSAQEFTKVQNKIKDLVASGQLGIFANGYWGHPAMQLPP 181

Query: 151 -----ARARFL----------HLMGLLAGKWPHSLALQPGGVTKAVDPGE----KIRLLS 191
                A A +L           ++ LL GK PH   L  GGV   ++        +  L 
Sbjct: 182 EVNLIAVAHYLQALECQRDANRVVALLGGKSPHIQNLAVGGVANPINLDSIGTLNLERLM 241

Query: 192 ILAEFREALETHLFADSLEAIAALDGLPALDAWADAAPPEAGDFRLFLHIARDLDFTGLG 251
            +  F + L     +D +E +  +D   A+ A       E G   +    A +    G  
Sbjct: 242 YIKSFIDKL-----SDFVEQVYKVD--TAVIAAYYPEWLERGKGAVNYLSAPEFPTDGKN 294

Query: 252 AG---PGRFISSGSFGLFAPGVWAQGASTPFDPAQVSEDHAHSW-MEGAILAPAVGKTIP 307
                PG +I++     + P       S  F    + E   H+W  + A  AP  G TIP
Sbjct: 295 GSFLFPGGYITNADLSTYRP---ITSHSDEFLIKGIQESAKHAWYKDEAPQAPWEGTTIP 351

Query: 308 APD--KPEG-YSWCKAPRLDGQVAEVGALARQVVDGHPLARALNAARPG----GSVHDRV 360
           A D    +G YSW K+P   G+  EVG LA  +     LA    + +       +++ ++
Sbjct: 352 AYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLC---KLAAGRESTQTKLNEIIALYQKL 408

Query: 361 VARLLELARLIPAMESWI-RAIRPAE----------------------PFCAPPSP-LGE 396
             + LE+A+L   +   I R +   E                       F  P  P  GE
Sbjct: 409 TGKTLEMAQLHSTLGRIIGRTVHCCELQNILQDQYNALIVNIGKGDYTTFVKPNIPATGE 468

Query: 397 GAAVGLVEAARGTLGHWLGLHNGRIAQYQIVAPTTWNFSPRDAQGNPGALEIALAGAPVL 456
              VG +EA RG L HW+ + +G I+ YQ V P+TWN  PR+   + G  E +L G P+ 
Sbjct: 469 FKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGPRNFNDDVGPYEQSLVGTPI- 527

Query: 457 PGETTPVAVQHVVRSFDPCMVCTVH 481
                P+ V   + SFDPCM C VH
Sbjct: 528 ADPAKPLEVVRTIHSFDPCMACAVH 552