Pairwise Alignments

Query, 171 a.a., RNA polymerase sigma factor from Magnetospirillum magneticum AMB-1

Subject, 168 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

 Score = 48.5 bits (114), Expect = 6e-11
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 8/122 (6%)

Query: 46  DVVLGLLERADLL---AEVE-NLTAYLLTAMVNRVRDLFRR-RRDLPMPEAMPAEPSQPA 100
           D+V   LERA +      VE +L A+L + +  +  D  RR RR   M E          
Sbjct: 31  DLVQSTLERAIISWADKRVEGDLRAWLFSILYRQFLDAHRRTRRYARMLEFFTGRDDAQP 90

Query: 101 GVEERL---ELTRALSLLSTAEQAVWLAVEMEGFAFVELAEAWGEPLGTLLSRKSRATRR 157
            VE  +      +A   L+T ++A+ L V +EG ++ E+AE    P+GT++SR SRA + 
Sbjct: 91  SVERTVIAQSTLQAFDQLNTEQRALLLWVSVEGLSYKEIAEILEVPIGTVMSRLSRARQA 150

Query: 158 LR 159
           LR
Sbjct: 151 LR 152